Pseudodesulfovibrio sediminis: PSDVSF_31190
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Entry
PSDVSF_31190 CDS
T08380
Name
(GenBank) hypothetical protein
Organism
psef
Pseudodesulfovibrio sediminis
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Gene cluster
GFIT
Motif
Pfam:
Cadherin_4
Big_9
Motif
Other DBs
NCBI-ProteinID:
BCS89877
UniProt:
A0ABN6EU70
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All DBs
Position
complement(3324970..3330174)
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AA seq
1734 aa
AA seq
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MADTTTTQQVPVLRIALPGPGETTSYLLTSDTLVKFTFDLSEAEFIGNGNNLEIIVEGGG
KIILEDYLILAEADSLPSFEMVGGDLVPGGIYMFAFEGADQPTDEDLETAAAAGATGSGA
GAYSDDAGSLFDGLNALGGQGDAYDSTTFEVTDPTDETIPAEGPIPPVAVDDVNLIVEDE
WNRGGEGGEGSWGQEQYGFVEGNLLLNDYDDDNIDYPETSGSQTELSVNTIDFPGEDFTG
NNPAAVPVTDAGVQVNGLYGTLTVFADGSYHYDLDQNLADPLREGQEVEEVFNYTAIDPE
GNSSNVATLTITVIGSNDAPDAFDDAPVEGVIEQGTEVAGIASVIGNVLHNDSDIDNIGY
EDLDPAYATLIPTDPDGVIELGVTSIYSNSTYQYDSTPENGAFTVNGQYGTLTINEDGSY
EYVLDQTKADPLNTEDDLVETFSYSMWDGDKYDHATLSIPVLGSNDAPIAAVDTNSFTEA
VDAAAAADVSGNVLANDTDIDNIDLGEVGTPELTITDIDYTGAGTPPARTSTAHVADNIV
EGEYGTLYLNDDGSYHYVEDKSATDPLNTDDAPVTDVFTYEVSDNQSGSALTDTATLTIT
IDGANDSPIAAVDTNSFTEAVDAAAAADVSGNVLANDTDIDNIDLGEVGTPELTITDIDY
TGAGTPPARTSTAHVADNIVEGEYGTLYLNDDGSYHYVEDKSATDPLNTDDAPVTDVFTY
EVSDNQSGSALTDTATLTITIDGANDSPIAAVDTNSFTEAVDAAAAADVSGNVLANDTDI
DNIDLGEVGTPELTITDIDYTGAGTPPARTSTAHVADNIVEGEYGTLYLNDDGSYHYVED
KSATDPLNTDDAPVTDVFTYEVSDNQSGSALTDTATLTITIDGANDSPIAAVDTNSFTEA
VDAAAAADVSGNVLANDTDIDNIDLGEVGTPELTITDIDYTGAGTPPARTSTAHVADNIV
EGEYGTLYLNDDGSYHYVEDKSATDPLNTDDAPVTDVFTYEVSDNQSGSALTDTATLTIT
IDGANDSPIAAVDTNSFTEAVDAAAAADVSGNVLANDTDIDNIDLGEVGTPELTITDIDY
TGAGTPPARTSTAHVADNIVEGEYGTLYLNDDGSYHYVEDKSATDPLNTDDAPVTDVFTY
EVSDNQSGSALTDTATLTITIDGANDSPIAAVDTNSFTEAVDAAAAADVSGNVLANDTDI
DNIDLGEVGTPELTITDIDYTGGGTPPARTSTAHVADNIVEGEYGTLYLNDDGSYHYVED
KSATDPLNTDDAPVTDVFTYEVSDNQSGDALTDTATLTITIDPANDTPIAVHDGSHDIFI
ESTVVTVIDDWSNISGSVYYGPGYTVTAEAFDELGAPVDDVAFTTWGNDQHLGILSGGSG
DSQKVDDDSPGEQITFEFDDPQSSFSIGFIAQGNNHVNAYVYPVGGGAPTLFTNVGNAVY
ITPGFDFDTIVFIPDGSFGMESLTTVTGGDTSITGVADGNVLANDFDIDNVDFDTAAAAG
NMGLLELSVTDVDSANAPANVASTGSDIGGDYYTIDGDFGSLKIYDTGEWNYDPFEEVDG
EGGWQHLEETSTDVFEYTVSDGSGGSDTAFIEVSLNVNSGNVLGGTGTVLGSDGNDVIFP
ESGDDVHSGAGSDVIVIDPENLGDGATSINILDFSDNDSLALGNLEGATVSITSDTNDVN
LVFSDINGSDDIVVNLLGVTPANDMVDQVVEITTSDDLNTLIQTIIDSGNDAII
NT seq
5205 nt
NT seq
+upstream
nt +downstream
nt
atggctgacacaactactacccaacaagtcccggtactgcggatagcattgcctggtccg
ggcgagacaacgtcgtatctccttacgtcggacactctggtcaagttcacctttgatctt
tccgaagcggaattcattggaaatggcaacaaccttgaaattatcgtggaaggcggtgga
aagataatccttgaggactatctgattctcgcagaagcagactccctgccttcctttgaa
atggttggcggcgacttggttccaggcggcatatatatgtttgcatttgaaggggcggac
caacccacggatgaagaccttgaaaccgctgcagccgcaggcgccactggctcgggcgca
ggtgcatacagtgatgatgcaggcagcctctttgacggtctgaatgcgctcggtggacag
ggcgatgcctatgactcgaccacattcgaagtgaccgatcctactgatgaaacaattcct
gccgaaggacctattccccccgtagccgttgatgacgtcaacctcatcgtagaggacgaa
tggaatcgcggcggcgaaggcggtgaaggctcttggggacaggaacagtatggctttgtt
gaaggcaacctgctgcttaacgactacgatgacgacaatatcgattacccggagaccagt
ggcagtcagacggaactttccgtcaacaccattgatttcccgggtgaagactttacagga
aataatcctgccgccgttcccgtcactgacgccggtgtgcaggtcaacggcctgtacggc
actttgaccgtttttgccgacggttcataccattatgatctggaccagaacctggcagat
ccgcttcgtgaaggacaggaagtggaagaggtgttcaattacaccgccatagatcctgaa
ggcaatagcagcaatgtcgcgaccctgaccatcaccgtgatcggcagcaacgatgctccc
gacgcgtttgatgatgcgcctgttgaaggagttatcgagcagggaaccgaagttgctgga
atcgcaagcgttatcggcaatgtcctccacaacgactccgacatcgacaacatcggctat
gaagatctggatcccgcgtatgcgaccctgatcccgaccgaccccgatggcgtcatcgag
cttggcgtcacttctatatatagtaatagcacctaccaatacgactccactcccgagaac
ggtgccttcaccgttaacggtcagtatggaacgctcaccatcaacgaagatggttcctac
gagtatgtacttgaccagaccaaggctgatccgctgaacaccgaagacgatctcgtcgag
acattcagctacagcatgtgggacggcgacaagtacgaccacgcaacgctgagtattccg
gtactcggttcaaatgatgcacccatcgccgcggtggacaccaactcctttaccgaggca
gttgacgcagccgcagcagcagacgtgtccggcaacgtgctggccaatgatacggacatc
gacaacatcgatctcggcgaagtcggcacacctgagctgaccatcaccgatatcgactac
accggcgctggcacaccgcctgcgcggaccagcaccgctcatgttgccgacaacatcgtg
gaaggcgagtacggtactctgtacctcaacgatgacggcagctaccactatgtggaagac
aagagcgcaaccgatccgctgaacacagacgacgcaccggtcacggacgtcttcacctac
gaagtctccgacaaccagtccggtagcgcactgactgacacggccacactgaccatcacc
attgatggtgccaacgactcgcccatcgccgcggtggacaccaactcctttaccgaggca
gttgacgcagccgcagcagcagacgtgtccggcaacgtgctggccaatgatacggacatc
gacaacatcgatctcggcgaagtcggcacacctgagctgaccatcaccgatatcgactac
accggcgctggcacaccgcctgcgcggaccagcaccgctcatgttgccgacaacatcgtg
gaaggcgagtacggtactctgtacctcaacgatgacggcagctaccactatgtggaagac
aagagcgcaaccgatccgctgaacacagacgacgcaccggtcacggacgtcttcacctac
gaagtctccgacaaccagtccggtagcgcactgactgacacggccacactgaccatcacc
attgatggtgccaacgactcgcccatcgccgcggtggacaccaactcctttaccgaggca
gttgacgcagccgcagcagcagacgtgtccggcaacgtgctggccaatgatacggacatc
gacaacatcgatctcggcgaagtcggcacacctgagctgaccatcaccgatatcgactac
accggcgctggcacaccgcctgcgcggaccagcaccgctcatgttgccgacaacatcgtg
gaaggcgagtacggtactctgtacctcaacgatgacggcagctaccactatgtggaagac
aagagcgcaaccgatccgctgaacacagacgacgcaccggtcacggacgtcttcacctac
gaagtctccgacaaccagtccggtagcgcactgactgacacggccacactgaccatcacc
attgatggtgccaacgactcgcccatcgccgcggtggacaccaactcctttaccgaggca
gttgacgcagccgcagcagcagacgtgtccggcaacgtgctggccaatgatacggacatc
gacaacatcgatctcggcgaagtcggcacacctgagctgaccatcaccgatatcgactac
accggcgctggcacaccgcctgcgcggaccagcaccgctcatgttgccgacaacatcgtg
gaaggcgagtacggtactctgtacctcaacgatgacggcagctaccactatgtggaagac
aagagcgcaaccgatccgctgaacacagacgacgcaccggtcacggacgtcttcacctac
gaagtctccgacaaccagtccggtagcgcactgactgacacggccacactgaccatcacc
attgatggtgccaacgactcgcccatcgccgcggtggacaccaactcctttaccgaggca
gttgacgcagccgcagcagcagacgtgtccggcaacgtgctggccaatgatacggacatc
gacaacatcgatctcggcgaagtcggcacacctgagctgaccatcaccgatatcgactac
accggcgctggcacaccgcctgcgcggaccagcaccgctcatgttgccgacaacatcgtg
gaaggcgagtacggtactctgtacctcaacgatgacggcagctaccactatgtggaagac
aagagcgcaaccgatccgctgaacacagacgacgcaccggtcacggacgtcttcacctac
gaagtctccgacaaccagtccggtagcgcactgactgacacggccacactgaccatcacc
attgatggtgccaacgactcgcccatcgccgcagtggacaccaactcctttaccgaggca
gttgacgcagccgcagcagcagacgtgtccggcaacgtgctggccaatgatacggacatc
gacaacatcgatctcggcgaagtcggcacacctgagctgaccatcaccgacatcgactac
accggcggcggaaccccgcctgcgcggaccagcaccgctcatgttgccgacaacatcgtg
gaaggcgagtacggtactctgtacctcaacgatgacggcagctaccactatgtggaagac
aagagcgcaaccgatccgctgaacacggacgacgcaccggtcacggacgtcttcacctac
gaagtctccgacaaccagtccggcgacgcactgactgacacggccacactgaccatcacc
attgatccggccaatgacactcccatcgcagtgcatgacggctctcatgatattttcatc
gagagcactgtcgtcaccgtaattgatgactggagtaacatcagcggctcggtctactat
gggcctggttacaccgtaaccgccgaggcctttgatgaactcggcgcccctgtcgatgac
gttgcattcacgacctggggtaacgatcagcacctcggcatccttagcggtggttccgga
gacagtcagaaggttgatgatgactcgcctggcgaacagatcacattcgagttcgacgac
ccgcagagttcgttcagcattgggttcatcgctcagggtaacaaccacgttaatgcatac
gtctaccccgttggaggcggagcaccgaccctgttcaccaatgttggtaacgcagtctac
atcaccccgggctttgatttcgacacgatcgtcttcatccccgatggttcattcggcatg
gaaagcctgacaaccgtgaccggcggagacacctccatcaccggcgtggcagacggcaac
gtgctggccaatgacttcgatatcgacaacgtggacttcgacaccgccgccgcagccggc
aacatggggctgctcgaattgagcgtgacggatgtggacagcgccaacgcacctgccaac
gtggcttccaccggcagcgacattggcggcgactactacaccattgacggcgacttcgga
tccctgaagatctacgacactggtgagtggaactatgatccgtttgaggaagttgacggc
gaaggcggatggcagcacctcgaagagacctccaccgatgtcttcgaatacaccgtatcc
gatggctccggcggctctgacaccgcattcattgaagtctcgctgaacgtgaactccggc
aacgtcctgggcggcaccggaaccgtgctcggcagcgacggcaatgacgtcatcttcccg
gaaagcggcgacgacgtgcactccggcgcaggatcggatgtcatcgtcattgatcctgaa
aacctgggtgatggagcaacatccatcaatatcctcgacttcagcgacaacgacagcctg
gctctgggcaacctggaaggcgcaacggtctcgatcacgtccgacaccaatgatgtcaac
ctcgtgttctccgacatcaacggcagtgatgatatcgtggtcaacctgctgggtgtcacc
ccggcaaacgacatggttgatcaggtggtggaaatcacgaccagcgacgacctgaacaca
ctgatccaaacgatcatcgactccggtaacgatgcaatcatctaa
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integrated database retrieval system