Pseudodesulfovibrio sediminis: PSDVSF_31330
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Entry
PSDVSF_31330 CDS
T08380
Name
(GenBank) C4-dicarboxylate ABC transporter
KO
K11688
TRAP-type transport system periplasmic protein
Organism
psef
Pseudodesulfovibrio sediminis
Pathway
psef02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
psef00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PSDVSF_31330
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
psef02000
]
PSDVSF_31330
Transporters [BR:
psef02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
PSDVSF_31330
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DctP
Arabinose_trans
PRANC
Motif
Other DBs
NCBI-ProteinID:
BCS89891
LinkDB
All DBs
Position
complement(3348663..3349730)
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AA seq
355 aa
AA seq
DB search
MLNLKRLTKTAALVAVFMMVAVTAQAAGFKKEYKMQVTVGPKLYWGMGATKFAELVKEKT
NGQIIVKPYFGSALLKGAQLKSSQMVAKGVIDCAMDSTINISPVIPEANIFHLPFFLNDF
ETLDKVKYGQAGEAVFEAMKAKRLQPLAWAENGFRQLTNSKVAVKTPEDMKGLRIRVVGN
PLFIDTFRALGADPVNMNWGDAVAGFQQGVVDGQENPVGVLIPIQIYQYHKYASMWNYLV
DPLIIYWNQREWKAFPNEIQAAILEAAKEAGRFETALSRAGLDGEISHDILKNEFNYTME
VPNPISFMESKGMEVHQLTDEERDAFAKATHSVYDKWIKEIGPEVYEKAKADIAR
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgttgaatctcaaacgactgacaaaaaccgcagcactggtcgctgttttcatgatggtc
gctgtcactgcacaggcagccggatttaaaaaagaatacaaaatgcaggtcacggttggc
ccgaagctttactggggcatgggtgcaacaaagttcgccgaactggtcaaggaaaagacc
aacggccagattatcgtcaaaccctacttcggttccgcgctgctcaagggcgcccagctg
aaaagctcgcaaatggtcgccaagggcgtcatcgactgtgcgatggattccaccatcaat
atcagcccggtcattcccgaagccaatatttttcatcttccctttttcctgaacgacttc
gagacgttggacaaggtcaagtacggtcaggccggtgaggccgtgttcgaggccatgaag
gccaaacgcctccagcctctggcctgggccgagaacggattccgccaactgaccaactcc
aaggtggcggtcaagacccctgaagacatgaagggcctgcgcatccgcgttgtcggcaac
ccgctgttcatcgacaccttccgcgctctgggcgccgacccggtcaacatgaactggggt
gacgctgtcgccggtttccagcagggcgtcgttgacggccaggagaacccggtcggcgta
ctgattcccattcagatctaccagtaccacaagtacgcatccatgtggaattatctggtt
gatcctctcatcatctactggaaccagcgggaatggaaagccttccccaatgaaatccag
gccgcgattctcgaagccgccaaggaagctggtcgctttgagaccgcactgagtcgcgcg
ggtctcgacggcgagatctcccacgacatcctgaaaaacgagttcaactacaccatggaa
gttccgaaccccatctccttcatggagagcaagggtatggaagtgcatcagcttaccgac
gaagaacgggacgcctttgccaaggccacgcactcggtctacgacaagtggatcaaggag
atcgggcctgaggtatacgagaaagccaaggctgacatagcccgctaa
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