Pseudodesulfovibrio sediminis: PSDVSF_31460
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Entry
PSDVSF_31460 CDS
T08380
Name
(GenBank) hypothetical protein
KO
K02002
glycine betaine/proline transport system substrate-binding protein
Organism
psef
Pseudodesulfovibrio sediminis
Pathway
psef02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
psef00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
PSDVSF_31460
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
psef02000
]
PSDVSF_31460
Transporters [BR:
psef02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Glycine betaine/proline transporter
PSDVSF_31460
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OpuAC
LolB
Motif
Other DBs
NCBI-ProteinID:
BCS89904
UniProt:
A0ABN6EY01
LinkDB
All DBs
Position
complement(3363196..3364149)
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AA seq
317 aa
AA seq
DB search
MSSGLRRIALAFFVIATLFCSSFSAQAAEKITIASVSWTGVTIKSEIAVSVLESLGYKAE
NKVFSVPITYSALSTGDADVFFGNWMPSMATIANKFFDKGTVIKYVANMPGAKYTLAVPT
YCAKAGLKDFSDIAKFGDKLDWKIYGIEPGNDGNMIIQDMIDKNMFGLGKFKLVASSEVA
MLSEVQALAKNDKWIVFLGWAPHSMNERIDMTYLTGSTDATFGGNDGTATVWTNIRKGLE
QDNPNVAALLKNMVFPVSMMNQIMTSVHKDKSLGFTKAGLKWLKDNPATYEQWLENVTTV
DGKPGAPAFKSFLDAKI
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgtcttctggccttaggcgaatcgcactcgccttcttcgtaatcgcaacccttttctgc
tcttctttctcggcacaagcggccgaaaaaatcactatcgccagcgtctcctggacaggc
gtaaccatcaaatcggagatcgcggtctcggtactggaaagcctcggctacaaggctgag
aacaaggtcttttccgttcccatcacctattccgccctgtctaccggcgacgccgatgtc
ttcttcggcaactggatgccttccatggcgaccatcgccaacaagttcttcgacaaggga
acggtcatcaagtacgtcgccaacatgcccggcgccaaatacacgctcgccgtcccaacc
tattgtgccaaggccggcctcaaggatttcagcgatatcgccaagttcggcgacaaactg
gattggaaaatttacggcatcgaacccggcaatgacggcaacatgattattcaggacatg
atcgacaagaacatgttcggtctgggcaagttcaagctggtggcttccagtgaagtggcc
atgctctctgaagtccaggcattggccaaaaacgacaagtggatcgtttttctcggatgg
gcgccgcacagcatgaacgaacgcatcgacatgacctatctgaccggcagcacggatgcg
accttcggtggcaacgacggcaccgcgaccgtctggaccaacatccgcaaggggctagag
caagacaaccccaacgtggcggcactgttgaagaacatggtcttcccggtttccatgatg
aaccagatcatgacttcggtgcacaaggacaaaagcctcggcttcaccaaggcaggactc
aagtggctcaaggacaatcccgccacctatgaacaatggctcgaaaacgtgaccaccgtg
gacggcaagcccggagccccggccttcaagtcctttctggacgcaaagatatag
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