Pseudodesulfovibrio sediminis: PSDVSF_31810
Help
Entry
PSDVSF_31810 CDS
T08380
Name
(GenBank) peptidase C39
KO
K11004
ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
Organism
psef
Pseudodesulfovibrio sediminis
Pathway
psef02010
ABC transporters
psef03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
psef00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
PSDVSF_31810
03070 Bacterial secretion system
PSDVSF_31810
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
psef02000
]
PSDVSF_31810
02044 Secretion system [BR:
psef02044
]
PSDVSF_31810
Transporters [BR:
psef02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
PSDVSF_31810
Secretion system [BR:
psef02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
PSDVSF_31810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
Peptidase_C39
SMC_N
AAA_29
AAA_16
DUF2269
ABC_ATPase
DUF87
AAA_22
MeaB
MMR_HSR1
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
BCS89939
LinkDB
All DBs
Position
3404977..3407151
Genome browser
AA seq
724 aa
AA seq
DB search
MGKKTNLNDEEKKDSTQQADTGLISLILLARYHSVAADPEGIRHKFAPPDEPMQDVDIMR
AARALSLKAKVLQRDCSSLDKVPFPAMAQMKDGTWLILGGAGNDDVLTQAPGERGVKKIP
LIEFEESWSGKLMLITKRTALPDALRQFNISWFIPALIKYKRLFGEVLLLSFFLQLFGLV
TPLFFQVVIDKVLVHKGLTTLDVLAIGLMVVFIFEVVMGGLRTWLFSHTTYRVDVTLGAQ
LFSHLVSLPLAYFNARRVGDSVARVRELENIRRFLTGSTLTVVLDLLFTGVFLVVMFFYS
WQLSFLVLGIMPFYIGLSVFVTPVLRKRLDEKFQRGAEQQAFLVETISGVQTLKSMAVEP
QFQRRWEDLLAGYVKSAFRTDNLGNFAVQATTFLSKLSTLLILWIGSRAVIDGDLSVGQL
IAFNMMAGRINSPILRLSKVWQDFQQAGVSLQRLGDILNNPTEPGYNPNRSTLPSLHGDI
KFENISFRYRSDTPFVLQDVNLHIRKGESVGIVGRSGSGKSTLTNLVQRLFVPEKGRVLV
DDIDLTLVDTAWLRRQIGVVLQENMLFNRSVRDNIALADPGASMDRVVNAAQLAGAHDFI
LELPEGYDTIVGEQGTGLSGGQRQRVAIARALMTNPRILILDEATSALDYESEHIIQQNM
SAISSGRSVLIIAHRLSTVKDCDRIVVVEKGQIVESGSHEQLVRTGGYYAKLWQYQSKDP
REAA
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaaaaaacaaacctgaacgacgaagaaaaaaaagactccacccagcaggcagat
acgggactcatctccctcattttactggcccgttatcacagtgtcgctgcagaccccgag
ggcattcgccacaaattcgcccccccggatgagcccatgcaagacgtggacatcatgcga
gcagccagggccctgagtctcaaggccaaggtcctgcaaagggattgttccagtcttgat
aaggtgccgtttccggctatggcccagatgaaggatggaacctggctgatcttgggggga
gcaggaaacgatgatgtgcttacccaagctcccggcgagcgaggggtgaagaagattccc
ctgatcgaatttgaggagtcctggtccggcaagctcatgcttatcaccaagcgcactgcg
ctgccagacgccctgcggcagttcaacatatcctggttcatcccggcactgatcaaatac
aagcggctgttcggcgaggtgttgctgctctccttttttctgcagcttttcgggctggtg
acaccgcttttttttcaggtggtcatcgacaaggtgctggtgcacaaaggactgaccacc
ctggacgtattggccataggcctcatggtcgtcttcatcttcgaggtggtcatgggaggc
ctgcgcacctggcttttttcccacaccacctaccgggtggacgttactctcggggctcag
cttttttcccatctcgtttccctgccattggcgtatttcaacgcccgccgcgtgggcgac
tccgttgcccgcgtgcgtgaattggaaaatatccggcgttttttgaccggatccacactg
actgtggttctggacctgctgtttaccggcgtatttcttgtggttatgtttttttacagt
tggcagctttcgttcttggttctgggcatcatgccgttctacatcgggctttccgtattc
gtgaccccggtgctgcggaaacgcctggacgaaaaatttcagcgcggagcagagcagcag
gcctttcttgtagaaactatcagcggcgtgcagacgctcaaatccatggcagtggaacca
cagtttcagcgtcgctgggaagatttgttggccggatatgtgaagtccgcattccgcacc
gacaacctgggcaacttcgcggtacaagccacaacttttttgagcaaactgagcacgctg
ctcattctttggatcggttcccgcgcggttattgacggcgacctgagcgtaggccaactc
attgccttcaacatgatggccgggcgaatcaacagccccatcctacgcctctccaaggtc
tggcaggattttcagcaggccggggtttcgcttcaacgcctgggagatattctcaacaac
cctacagagcccggctacaaccccaaccgctcaaccctcccttcgctgcacggggatatc
aaattcgagaacatcagctttcgctaccgttcggatactccttttgtgcttcaggacgtc
aaccttcacatccgcaaaggagaaagcgtaggcattgttgggcgttccgggtcaggcaag
agcacattgaccaacctggtacagcgtctgttcgtgcctgaaaagggacgggtgctggtg
gatgatatcgacctgactctggtggatacagcctggctgcggcggcagattggcgttgtg
ctccaggaaaatatgcttttcaaccgttccgtgcgcgacaacattgccttggctgacccc
ggggcgagcatggaccgggtggtgaatgcggcccagctggctggggcgcacgatttcatt
ctggaattgcccgagggatacgataccatcgtcggagagcagggcaccgggctttccggc
gggcagcgccagcgcgtcgccattgcccgtgccctcatgaccaacccgcggattcttatt
ctggacgaggccaccagtgccctggactatgagtccgagcatatcattcagcagaatatg
tcggccatctcttcgggcaggagcgtgctgatcattgcccaccgcctgtccacggtcaag
gattgcgaccgcatcgtagtggtggaaaaaggacaaatcgtggaatccggcagccatgag
caacttgtgcgtacgggcggatattacgccaagttgtggcagtaccaatccaaggacccc
cgggaggctgcgtga
DBGET
integrated database retrieval system
