Pseudodesulfovibrio sediminis: PSDVSF_33380
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Entry
PSDVSF_33380 CDS
T08380
Symbol
icd
Name
(GenBank) isocitrate dehydrogenase
KO
K00031
isocitrate dehydrogenase [EC:
1.1.1.42
]
Organism
psef
Pseudodesulfovibrio sediminis
Pathway
psef00020
Citrate cycle (TCA cycle)
psef00720
Other carbon fixation pathways
psef01100
Metabolic pathways
psef01110
Biosynthesis of secondary metabolites
psef01120
Microbial metabolism in diverse environments
psef01200
Carbon metabolism
psef01210
2-Oxocarboxylic acid metabolism
psef01230
Biosynthesis of amino acids
psef04146
Peroxisome
Module
psef_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Brite
KEGG Orthology (KO) [BR:
psef00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
PSDVSF_33380 (icd)
09102 Energy metabolism
00720 Other carbon fixation pathways
PSDVSF_33380 (icd)
09106 Metabolism of other amino acids
00480 Glutathione metabolism
PSDVSF_33380 (icd)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
PSDVSF_33380 (icd)
Enzymes [BR:
psef01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.42 isocitrate dehydrogenase (NADP+)
PSDVSF_33380 (icd)
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Ortholog
Paralog
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Motif
Pfam:
Iso_dh
FTR1_4HB
Motif
Other DBs
NCBI-ProteinID:
BCS90096
UniProt:
A0ABN6EY59
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All DBs
Position
complement(3562892..3564034)
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AA seq
380 aa
AA seq
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MATKTVYYIEGDGVGPEVWKAGRPVLNAAIEKAYGDTNKLDWQELLAGEKGYAETGEHLP
KATMDALSKADLAMKGPLNTPVGEGFRSLNVTLRQVFDLYACIRPIKYFKGIESPVKRPE
LVDMTVFRENTEDVYAGIEYQSGSPEAKKLIEFLVDELGANVDSTAGVGIKPITPAGSKR
LVKKALDFAIAENKPSVTLVHKGNIMKTTEGGFRKWGYELADQEYAGKVVREGADGDGVI
IKDRIADAMFQNVLMYPEQYSVIATTNLNGDYISDALAAQVGGLGLAPGVNMGDTLAFFE
PTHGTAPTIAGKDMANPGSLILSGAMMLEHLGWHEAAALIHASVEKALSDKKVTVDLAAQ
IKGSTEVGCQEFGEILLANL
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
ttggcaactaaaaccgtatattacatcgaaggcgacggcgtcggccccgaagtctggaag
gccggccgccctgtactcaacgcagccattgaaaaagcgtatggcgacaccaacaagctg
gactggcaggaactgctggccggtgaaaaagggtatgccgagaccggcgagcatctgccc
aaggcaaccatggacgccctgtccaaggccgatctggccatgaaaggcccgctcaatacc
cctgtcggcgaaggcttccgcagcctcaacgtcactctgcgtcaggtctttgacctctat
gcctgtatccgccccatcaagtatttcaagggcatcgaatccccggtcaagcggcccgaa
ctggtcgacatgaccgtgttccgcgaaaacaccgaagatgtctacgcaggtattgaatac
cagtccggcagcccggaagccaagaaattaattgagttcctcgtggacgaactgggcgcc
aacgtggacagcaccgccggcgtaggcatcaagcccatcactcccgccggatccaagcgt
ctcgtcaagaaggctctggacttcgccattgccgagaacaagccgtccgtgaccctggtt
cacaaaggcaacatcatgaagaccaccgaaggtggcttccgtaaatggggctatgagctg
gccgatcaggaatatgctggcaaggttgttcgtgaaggcgctgatggcgatggtgtcatc
atcaaggatcgcatcgctgacgccatgttccagaacgtgctcatgtacccggaacaatat
tctgtcatcgccaccaccaacctgaacggcgattacatctccgacgcactggccgcacag
gtaggcggactcggccttgctccgggcgtaaacatgggcgacacgctcgctttcttcgaa
cccacccacggcaccgcgccgaccatcgcaggcaaagacatggccaaccccggttcgctc
attctttccggcgccatgatgctcgaacacctcggctggcacgaagcggccgccctgatt
cacgcatccgtcgagaaagccctgtccgacaaaaaggtcacagtcgacctggccgcacag
atcaaaggctccacggaagtcggttgtcaggaattcggtgaaattctgctcgccaacctg
tag
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