Pseudodesulfovibrio sediminis: PSDVSF_33400
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Entry
PSDVSF_33400 CDS
T08380
Symbol
trpB
Name
(GenBank) tryptophan synthase beta chain
KO
K06001
tryptophan synthase beta chain [EC:
4.2.1.20
]
Organism
psef
Pseudodesulfovibrio sediminis
Pathway
psef00260
Glycine, serine and threonine metabolism
psef00400
Phenylalanine, tyrosine and tryptophan biosynthesis
psef01100
Metabolic pathways
psef01110
Biosynthesis of secondary metabolites
psef01230
Biosynthesis of amino acids
Module
psef_M00023
Tryptophan biosynthesis, chorismate => tryptophan
Brite
KEGG Orthology (KO) [BR:
psef00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
PSDVSF_33400 (trpB)
00400 Phenylalanine, tyrosine and tryptophan biosynthesis
PSDVSF_33400 (trpB)
Enzymes [BR:
psef01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.20 tryptophan synthase
PSDVSF_33400 (trpB)
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GFIT
Motif
Pfam:
PALP
NAD_Gly3P_dh_N
Motif
Other DBs
NCBI-ProteinID:
BCS90098
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Position
3565288..3566634
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AA seq
448 aa
AA seq
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MFVKKIFLPQDQMPTQWYNPMPDLPTPLAPPLNPGTLEPLTPADLAPIFPDSLIAQEMSQ
DRFIDIPEEVLDVYKIWRPSPLVRADKLEKAIGAKCKIYYKDESGSPAGSHKPNTSVPQA
YYNKLEGVERLATETGAGQWGTALSFACAQFDMECVVYMVKVSYEMKPYRKMIINTYGGT
IFPSPSEETRTGREMLEKDPDCKGSLGLAISEAVEDAATHDNTKYALGSVLNHVLIHQTI
TGLEVQKQLEMVGETATHLVGCVGGGSNFGGLVLPFLPQKLAGDPVKFIPVEPKACPTLT
RGEYRYDFGDMARLTPLVKMHTLGHDFMPAPIHAGGLRYHGDAPIVCNIVEEGLTEPVAY
FQTECFEAAKLFMQTEGFLPAPETSHAIKGAIEAAKTAGPDDVIVFLYSGHGMLDLASYD
AFNQGLLTNFELPQRDIEEALKACPKVD
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgtttgtcaaaaaaatctttctaccccaggaccagatgccaacgcagtggtataacccc
atgccggacctgcccactccgttggctccgcccctgaatcctggaaccctggaaccgctg
actccagctgatctcgcccctatttttcccgactctctgatcgcacaggaaatgagtcag
gatcgtttcatcgatatcccggaggaagtgctggatgtttacaagatctggcgtccgtct
ccgctcgttcgggccgacaaactggaaaaggccatcggtgccaaatgcaaaatctactac
aaggatgagtccggctctccggctgggtcgcacaagccgaacacttcggttccccaagca
tactacaacaaactcgaaggcgtagagcgtctggccacggagactggtgccggacagtgg
ggcacggccctgtcctttgcctgtgcgcagttcgacatggaatgcgtggtctacatggtc
aaggtcagctacgaaatgaagccgtaccgcaaaatgatcatcaacacctacggcggcacc
atttttccgtccccgtctgaagaaacccgcacaggtcgcgagatgctggaaaaagacccg
gactgcaagggatcccttggactggccatctccgaagccgttgaagacgcagccacgcac
gacaacaccaagtacgcgcttggttccgtgctcaatcacgtcctcattcatcagaccatc
accggtctggaggttcagaagcagcttgaaatggtcggggagacagccacgcacctcgtg
ggttgtgtgggcggaggatcgaacttcggcgggctggtgctgccgttcctgccgcagaag
ctggctggtgatccggtcaaattcataccggtcgagccaaaggcctgcccgactctgact
cgcggcgaatatcgctatgatttcggagatatggctcgcttgaccccgttggtgaagatg
cacacgctgggacacgatttcatgcccgcgcccatccacgccggtggcctgcgctatcac
ggcgatgctcccatcgtctgcaacattgttgaggaagggctgactgaaccggtggcctat
ttccagactgaatgctttgaagccgccaagctcttcatgcagaccgagggattcctgcct
gcgcctgagacctctcatgctatcaagggagcgattgaagcggccaaaacagccggtcct
gatgacgtgatcgtcttcctgtactccggtcacggcatgcttgatctggcttcgtacgac
gccttcaatcaggggttgctcaccaacttcgaactgccgcagcgggacatcgaggaagcg
ctcaaggcgtgtccgaaagtggactag
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