Pseudodesulfovibrio sediminis: PSDVSF_33760
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Entry
PSDVSF_33760 CDS
T08380
Symbol
nifA-1
Name
(GenBank) hypothetical protein
KO
K02584
Nif-specific regulatory protein
Organism
psef
Pseudodesulfovibrio sediminis
Pathway
psef02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
psef00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PSDVSF_33760 (nifA-1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psef03000
]
PSDVSF_33760 (nifA-1)
Transcription factors [BR:
psef03000
]
Prokaryotic type
Helix-turn-helix
Other families
PSDVSF_33760 (nifA-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF_2
AAA
HTH_8
AAA_3
Mg_chelatase
AAA_5
MCM
Motif
Other DBs
NCBI-ProteinID:
BCS90134
LinkDB
All DBs
Position
complement(3602561..3604141)
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AA seq
526 aa
AA seq
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MSTTTQDTSDLSYLNTLKLVQDTLTQDTPFEESLNELLKLLARDMGYVRAFMVIMDPKTE
NLKLSLTYSPAQTDDVTYSPGRGIIGRVFDSGESITITRLSDDPEFLNKAFGRSEDELKK
LGFICVPVINLRTDDIEVIGALSVDVPLIPADDMAAHRQFLEVVAGIIAGHVAQLQEEMA
TQNHLLSQGLMSGGTETPTPKDFVAASKAMRLVLRQSGQVAPSRATALLRGESGTGKELL
AEAIHSSSPRADKPLIKLNCAALPSELIESELFGHQKGAFTGAFQTKRGLFEVADQGTLF
LDEIGELSMDAQAKVLRAIQEKEIQRVGSEQTITVDVRLICATHQPLEELLEKGLFREDL
YYRINVFPIFIPPLKERREDILPLAEHFLSDFTDEYGKEVKRISTPAIELLSMYHWPGNV
RELKNCLERAVLLCEEKVIRTYHLPPTLQSAESSATGTNLSFGEAVAKFEQELLIDSLKK
TGGNMLQSARDLRVSYRIVNYKVKKYNIDVKKYSQSKKRMKNKLEG
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atgtctaccacaacacaagacacctctgacctcagttacctgaacacgctcaagctggtt
caggacacactgactcaggacaccccctttgaggagtctttgaatgaactgctgaaactg
ctggccagggacatgggatatgtccgggcgttcatggtcatcatggaccccaagaccgag
aacctcaaactctcgctcacctattctcctgcccagacagatgatgtcacctactcacct
ggccggggtatcatcggccgcgtgttcgactccggtgaatccatcaccattacgcgactc
tccgatgatcccgagttcctgaacaaggcgttcggtcggtccgaagacgaactcaagaag
cttggattcatatgcgtgcccgtcatcaacctgcgcactgacgatattgaagtcattggc
gcgctctctgttgacgttccgctcatccctgccgacgacatggccgcccaccgccagttc
ctggaagtggtcgcgggcatcatcgcaggccacgttgcccagttgcaggaggaaatggcc
acccagaaccacctgctttcacagggcctgatgtccggtggaaccgaaacgcccaccccc
aaggactttgtggccgcatccaaggccatgcgtctggtgctcaggcagtccggtcaggtg
gcgcccagccgggcaaccgccctgttgcgcggcgaatccggcacaggcaaggagctactg
gccgaggctattcattcctccagccccagagccgacaaaccgctcatcaagctcaactgc
gcggccctgccgtccgaactcatcgagtccgaactgttcggtcaccagaagggagccttt
accggcgcctttcagaccaaacgcggactgttcgaggtggccgaccagggcaccctgttc
ctggatgaaatcggcgagctgtccatggatgcccaggccaaggtgctgcgggccattcag
gaaaaggaaatccagcgagtcggctccgagcagaccatcacggttgacgtgcgcctcatc
tgcgccacccatcagccgctcgaagagctgctcgaaaaagggttgttccgcgaggatctc
tactatcgaatcaacgtcttccccatcttcatcccgccactcaaggaacgccgtgaggac
atcctgcccctggcagaacatttcctgagtgatttcaccgatgaatacggcaaggaagtc
aaacgcatatccacgcccgccatcgagctgctgagcatgtatcactggcccggaaacgtg
cgtgaactcaaaaactgcctggagcgcgcggtcctgctctgcgaagaaaaggttatccgc
acctaccacctgccgcccacactccagtcggcggaaagctccgccaccggcaccaacctc
tcctttggcgaggccgttgccaagttcgagcaggagctgctcattgactcgctcaagaag
accggcggcaacatgctgcaaagcgcccgcgatctacgcgtctcgtaccgaatcgtcaac
tacaaggtgaagaagtacaacatcgacgtgaaaaaatactcgcagtcaaaaaagagaatg
aaaaacaagctggaaggctaa
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