Pseudodesulfovibrio sediminis: PSDVSF_34170
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Entry
PSDVSF_34170 CDS
T08380
Symbol
clpB
Name
(GenBank) chaperone protein ClpB
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
psef
Pseudodesulfovibrio sediminis
Brite
KEGG Orthology (KO) [BR:
psef00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
psef03110
]
PSDVSF_34170 (clpB)
Chaperones and folding catalysts [BR:
psef03110
]
Heat shock proteins
HSP100
PSDVSF_34170 (clpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
AAA
ClpB_D2-small
Clp_N
AAA_5
AAA_22
AAA_16
Sigma54_activat
nSTAND3
AAA_14
NACHT
ATPase_2
TniB
IstB_IS21
AAA_24
AAA_7
AAA_18
RNA_helicase
NBD_SMAX1
Zeta_toxin
T2SSE
DUF447_C
KIF9
DUF7401
LonB_AAA-LID
DUF63
Motif
Other DBs
NCBI-ProteinID:
BCS90175
UniProt:
A0ABM7PAN1
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Position
3640825..3643422
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AA seq
865 aa
AA seq
DB search
MDPNTFTRKTQDAVSEAQNLAIRNGHQQIDCEHLMHALVAQEQGLVPQILRKLGVAPDVY
LGAVDAEISKMPRVTGSGARPDQIVVTQRMQKVLVAADDMKKSMKDEFVSVEHVFVALMD
EAPSTGIGRVNKQFALNKNKVLGALEEVRGKQRVTSDNPEATYESLQKYGRDLVEEARSG
KLDPVIGRDGEIRRVIRILSRRTKNNPVLIGEAGVGKTAIAEGLAQRIVKGDVPEGLKDK
TVFSLDMSALVAGAKYRGEFEERLKAVLKEVQESAGQIIMFIDELHTIVGAGKTDGAMDA
GNILKPLLARGELHCIGATTTDEYRKYIEKDPALERRFQTIVVDEPSVEDTISILRGLKE
RFEVHHGVRIADGAIVEAAVLSSRYISDRQLPDKAIDLIDEAAALIRTEIDSQPYELDKA
NRQIMQLEIEREALKRESDKASRERLVELERKLAELKEFQATLQTQWENEKGGIERLRSL
KEEIETTRHQVEEAKRVHDYNRAAELEYGRLGSLEKELADRNEALESGDVPRMVKEEVGP
DDVAQVIAKWTGIPVSRLLEGEREKLLKLADVLHERVIGQDGAVQAVADAVLRARAGLKD
PSKPIGSFIFLGPTGVGKTELCKTLAAALFDSESNMIRIDMSEYMEKHTVARLIGAPPGY
IGYDEGGQLTEAVRRKPYSVILFDEIEKAHHDVFNVLLQILDDGRLTDSHGRTVDFKNTI
VIMTSNLGAEYMLDGIDATGEFKEGVQEQVMEVLRRHFRPEFLNRVDESVLFRPLTPQQL
VGIIDLLIAGLRMRLEDRKIGLDLTDKAKAFIAQAAYDPNFGARPLHRYLQTHLETPLAR
KLIGGELGEGTTVTVDEKDGGLVFE
NT seq
2598 nt
NT seq
+upstream
nt +downstream
nt
atggatcccaatacctttactcgtaaaactcaggacgctgtttccgaggcccagaatctg
gccattcgaaatggccatcagcagatagactgcgaacacctcatgcatgccctggtcgcc
caggagcaggggcttgttccgcagattctgcgcaaactcggcgtggccccggatgtatat
ctgggagctgttgacgccgagatatccaagatgccccgtgtcaccggttccggtgcgcgc
cccgatcagatcgtggtcacccagcgcatgcagaaggtgctggtggcggctgacgacatg
aagaagtccatgaaggacgagttcgtgtctgtcgagcacgtctttgtggcgctcatggac
gaagccccgtccacaggcatcggtcgggtgaacaagcagtttgctctgaacaagaacaag
gtgctcggcgcgcttgaggaagtgcgcggcaaacagcgcgtgacctctgacaatcccgaa
gcaacctatgaatccttgcagaaatatggccgtgaccttgttgaagaggcccggtccggc
aagcttgatccggtcattggccgtgacggtgaaattcgtcgcgtcatccgtatcctgtcc
cgtcgcaccaagaataacccggtgcttatcggtgaggccggtgtgggcaagaccgccatt
gccgagggccttgcccagcgcattgtcaaaggcgatgtgcctgaaggcctcaaggacaag
accgtgttttctctggatatgtcggcactcgttgccggagccaagtatcgtggtgagttt
gaggaacggctcaaggccgtgctcaaggaagtgcaggaatctgctggacagatcatcatg
ttcatcgatgaactgcacaccattgtgggcgcgggcaagaccgacggcgccatggacgcg
ggcaacatactcaaaccgttgctggcgcgcggcgaactgcattgtattggtgccaccaca
acggatgaataccgtaaatatattgaaaaggacccggccctggagcgcaggtttcaaacc
atcgtcgtggacgaacccagtgtcgaggacaccatctccattttgcgtggcctcaaggag
cggttcgaagtgcatcatggcgtgcgcatcgccgacggtgccattgtcgaggctgccgta
ctttccagtcggtatatctccgaccgtcaactcccggataaggccattgacctcattgat
gaggccgcggcgctgatccgcacggagatcgactcccagccatatgagttggacaaggcg
aatcgtcagatcatgcagcttgaaatcgagcgcgaagccttgaaacgggagtctgacaag
gcgtctcgcgaacggctcgttgagcttgaacgcaagctggccgaactcaaggaattccaa
gccactctccagacccagtgggagaacgagaagggcggcatcgagcggttgcggtctctc
aaggaagagatcgaaaccactcgtcaccaggtcgaagaagcaaagcgtgtacacgattac
aaccgtgccgccgagctggaatacggccgtcttggttcgcttgaaaaagagctggctgat
cgtaacgaggcgctggagtccggcgacgtgccccgcatggtcaaggaagaggtcggcccg
gacgatgtcgcgcaggttatcgccaagtggaccggcattcctgtttcccgtctgctggaa
ggggagcgggagaagctgctcaagctggcggacgtgcttcacgaaagagtcatcggacag
gatggcgcggttcaggccgtggctgacgcggtcttgcgcgcccgtgccggactgaaggat
ccgtccaagcccatcggttcgttcatcttcctcggccccaccggcgtgggcaagaccgag
ttgtgcaagactctggcagccgcgctgtttgattccgagtcgaacatgattcgtatcgac
atgtccgagtacatggagaaacataccgtggcccgacttattggagcgcctccgggctac
atcggctatgatgaaggcggacagctcaccgaggccgtgcggcgcaaaccgtattcggtc
atcctcttcgacgagattgagaaggcgcatcatgacgtgttcaacgtgctccttcagatc
cttgacgacgggcggttgactgattctcatggccgcaccgtggacttcaagaacaccatt
gtcatcatgacaagcaatctcggcgccgagtacatgctcgacggcattgatgcgacaggt
gagttcaaggagggcgtgcaggaacaggtcatggaagtgctgcggaggcatttcagaccg
gaattcctgaaccgggtggatgaaagcgtgctgttcaggccgctgacgccgcaacagctt
gtgggtatcatcgacctgctgatagccggactcaggatgcgcctggaagatcgcaagatc
gggttggacctgaccgacaaggccaaagcctttattgcccaggcagcctatgatcccaac
ttcggcgccaggccgttgcaccggtatctccagactcatctggaaactccgttggccagg
aagcttatcgggggagagctgggtgagggcacgactgtcaccgtagatgaaaaagatggt
ggtctggtcttcgaataa
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