Pseudodesulfovibrio sediminis: PSDVSF_35360
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Entry
PSDVSF_35360 CDS
T08380
Name
(GenBank) 12,18-didecarboxysiroheme deacetylase
KO
K22226
Fe-coproporphyrin III synthase
Organism
psef
Pseudodesulfovibrio sediminis
Pathway
psef00860
Porphyrin metabolism
psef01100
Metabolic pathways
psef01110
Biosynthesis of secondary metabolites
psef01240
Biosynthesis of cofactors
Module
psef_M00847
Heme biosynthesis, archaea, siroheme => heme
Brite
KEGG Orthology (KO) [BR:
psef00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
PSDVSF_35360
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GFIT
Motif
Pfam:
Radical_SAM
Fer4_12
SPASM
Motif
Other DBs
NCBI-ProteinID:
BCS90294
UniProt:
A0ABM7PB77
LinkDB
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Position
complement(3749282..3750475)
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AA seq
397 aa
AA seq
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MIGISKLYCGAVESSDALRYNRESGQLPSHLLQFSKDKKPVVVWNMTQRCNLKCVHCYAH
AVDPSDHKDPISNEQAKVMIDDLAQFGAPVMLFSGGEPLVREDLVDLAKYATSKGMRAVI
STNGTLITKSKARELKEVGLSYVGISIDGNEEVHDKFRGVSGSYKQALKGVENCLAEGLK
VGLRFTINKRNAVEVPHLFDLIEDMDIPRICFYHLVYSGRGSELIKEDLNHQETRDVVDL
IMDRTRALFDKGLPKEVLTVDNHADGPHVYYRLLKEDPERAKEVLELLKMNEGNSTGRGI
GCISWDGKVHADQFMRHHTFGNVLERPFSEIWTDPNIELLHKLKDKRPHVGGRCAKCRFL
NICGGNFRARAEAYYDDFWAQDPACYLTDEEITGEKL
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgataggaatttcgaaactttactgtggtgctgtcgaatcatccgacgcattgcgttac
aaccgcgaatccgggcagctgccgtcccaccttcttcaattctccaaggacaaaaagccc
gtcgttgtctggaacatgacacaacgttgcaacctcaagtgtgtacattgttacgcccat
gcggttgatcccagcgaccacaaagaccccatttccaacgaacaagccaaggtaatgatc
gatgatctcgcccagttcggcgcacctgtcatgctgttctccggtggcgagccactggtc
cgcgaggacctggtcgacctggcaaagtacgcaacctccaagggtatgcgtgctgtcatt
tccaccaacggcacactcatcaccaaatccaaggctcgggagctgaaggaagtcggtctc
tcctacgtcggtatttccatcgacggcaacgaagaggtccacgacaaattccgtggcgtg
tccggctcctacaagcaggcgctcaaaggcgttgagaactgcctggccgagggactcaaa
gtcggcctgcgtttcaccatcaacaagcgcaacgctgttgaagttccccacctcttcgat
ctcatcgaggacatggacattccccgtatctgtttctaccacctggtctactccggccgt
ggttccgagctgatcaaggaagacctgaatcatcaggagacccgcgatgtcgtcgatctg
atcatggatcgtacccgcgcgttgttcgacaagggactgcccaaggaagtcctgaccgtc
gacaaccatgctgacggcccgcacgtctactatcgcctgctcaaggaagaccccgaacgc
gccaaggaagtgcttgagctgctcaagatgaacgagggcaactccaccggacgcggcatc
ggctgtatctcctgggacggcaaggtgcacgctgatcagttcatgcgtcaccacaccttc
ggcaacgtgctggaacgcccgttctccgaaatctggaccgacccgaacatcgaactgctg
cacaaactcaaggacaagcgtcctcacgttggcggccgttgcgccaagtgtcgcttcctg
aacatctgcggcggtaacttccgcgcccgcgccgaagcctactacgatgacttctgggca
caagacccagcctgctatctcaccgacgaagaaatcaccggcgagaagctgtaa
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