Paraflavitalea soli: D3H65_01040
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Entry
D3H65_01040 CDS
T05640
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
pseg
Paraflavitalea soli
Brite
KEGG Orthology (KO) [BR:
pseg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pseg03032
]
D3H65_01040
03400 DNA repair and recombination proteins [BR:
pseg03400
]
D3H65_01040
Enzymes [BR:
pseg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
D3H65_01040
DNA replication proteins [BR:
pseg03032
]
Prokaryotic type
DNA Topoisomerases
D3H65_01040
DNA repair and recombination proteins [BR:
pseg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
D3H65_01040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Peptidase_M61_N
Motif
Other DBs
NCBI-ProteinID:
AXY72642
UniProt:
A0A3B7MED4
LinkDB
All DBs
Position
complement(267833..268927)
Genome browser
AA seq
364 aa
AA seq
DB search
MPETAVDTTHLSHQQMLVIDQDYERTAKVAALVYVSDTMPGISRLKKGKGFSFLYQNKRL
QNKAQLDRIRKLAIPPAWTAVWICPLENGHLQATGKDARNRKQYRYHAAWQAVRNETKFH
RLYEFGKALPVLRLQMEKDISRKDLCEEKVLATVVSLMERTYIRTGSQSYEKLYGSYGLT
TLKDKHVAINGHSIQFSFRGKKGINHTISVKNKRLARIVQACRDIPGKELFQYYDADHNR
KSIDSGMVNNYIKQITGFEFSAKDFRTWAGTLNILHSFKSIGEAFTEAGRRKKVVEALDE
VSVQLGNTRSVCKKYYVHPGIIRLYEENNLQKYLKELDTLEEPDDKTGHTAEEKVLMKIL
KALQ
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaaacagccgtcgataccacccatttaagccaccagcaaatgctggtcattgac
caggactatgaacgcaccgccaaagtagccgccctggtatatgtgagcgataccatgcct
ggcattagcagattgaaaaagggaaaaggcttttcctttctataccaaaacaaacggcta
cagaataaagcacaactcgaccgcattcgcaaactggccattccgccagcctggacagcc
gtatggatatgtccgctggagaatggccacctgcaggccaccggcaaggatgcccgcaac
aggaaacaataccggtatcatgcagcctggcaggcagtacggaacgaaaccaagtttcac
cgcctgtatgaatttgggaaagcgttgcctgtgctgagactacaaatggaaaaggatatt
tcccgcaaagatctctgtgaagagaaagtgctggctaccgtagtcagcctcatggaaagg
acctatatccggaccggcagccagagctatgaaaagctgtatggctcctatggccttact
accctaaaagacaaacatgtagcgataaatggacattccatccagttcagcttccggggg
aagaagggcatcaaccacaccatatcagtaaaaaacaagcggttggccaggatcgtacag
gcctgccgcgatatacccggtaaggaactattccagtattacgacgccgatcacaacaga
aaaagcattgactccgggatggtgaacaattacatcaaacaaataaccggctttgaattc
agcgccaaggatttccgtacctgggcaggcacgttaaacatactccatagcttcaagagt
attggggaggcttttaccgaagccgggcgcaggaaaaaagtagtggaagccctggacgag
gtcagcgttcaattgggcaacacccggtcagtatgtaaaaagtattatgtacatcccggc
atcataaggctgtatgaagaaaacaaccttcaaaaatacctgaaggagttggataccctc
gaagaacccgacgacaagaccggccacaccgccgaagagaaggtgttgatgaagatcctg
aaagcccttcagtaa
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