Paraflavitalea soli: D3H65_09805
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Entry
D3H65_09805 CDS
T05640
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
pseg
Paraflavitalea soli
Pathway
pseg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pseg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
D3H65_09805 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pseg03019
]
D3H65_09805 (pnp)
03016 Transfer RNA biogenesis [BR:
pseg03016
]
D3H65_09805 (pnp)
Enzymes [BR:
pseg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
D3H65_09805 (pnp)
Messenger RNA biogenesis [BR:
pseg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
D3H65_09805 (pnp)
Transfer RNA biogenesis [BR:
pseg03016
]
Prokaryotic type
tRNA degradation factors
D3H65_09805 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
KH_1
PNPase
S1_RRP5
KH-I_KHDC4-BBP
OB_RRP5_4th
KH_Vigilin
KH_NusA_1st
Motif
Other DBs
NCBI-ProteinID:
AXY74251
UniProt:
A0A3B7MUX3
LinkDB
All DBs
Position
complement(2662823..2664988)
Genome browser
AA seq
721 aa
AA seq
DB search
MLSQPISVTFDIGGGRMVSIETGKLARQAHGAVTVRQGNSIMLATVVANKEPKEGQDFFP
LVVDYNEKFASAGRIPGSFFKREGRLNDYEVLVSRLIDRSLRPLFPEDYFCDVQVLITLI
SSDKEVMPDALACLAASAALAVSDIPIKEVISQVRVARIDGNFVVNPSRTELATADMDFL
IAATDKNLMMVEGESKECSEEDLVKALEIAHEAIRLQIKAQIELRDKAGVTGKREYTKPV
VNEELREKVAAFTKDKIYAIAKSASAKHDRSDAFDKLKKELIESLGEEVEDSTKKLAKKY
YEDLQWELVRDMMINDRVRLDGRKLDQVRGLAMEIDPLPSPHGSALFTRGETQSLTTVTL
GTPLDELLVESAANSEYTKFILHYNFPPFSTGEVKMMRGPGRREVGHGNLAMRSLKQMMP
GNEYPYTVRIVSDVLESNGSSSMATVCAGSLALMDAGVPLPKHVGGVAMGLVTRAADNKY
AILTDILGDEDHLGDMDFKVTGTREGICGVQMDIKIDGLSMDTMREALEQARKGRLHILE
AMYECIPAAREEVKPHAPRMEKLFIDKEFIGAVIGPQGKIIQEIQRETGTTINIEEVGNY
GEVSVFSPAKEGLDKAVAWIKGITAMPEVGSVYEATVKGIKEFGAFVEFLPGKQGLLHIS
EISHKRLETMEGVLKEGEKVKVKLIGIDHKTGKFKLSRKVLMPKPDGAPRSPQGNGAAPQ
Q
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atgctctctcaacctattagtgtaacatttgacatcggtggtggccgtatggtatccatc
gaaaccggtaaactggcccgccaggctcatggcgccgttaccgttcgccagggaaacagc
attatgctggctaccgttgtagcaaataaagagcccaaagaagggcaggatttttttccc
ctcgtagtagattataatgaaaaatttgcctctgctggtcgtatccccggctctttcttc
aaaagagaaggcagactgaacgattatgaagtattggtaagccgtttgatcgaccgctct
ttacgccctttatttcctgaagattatttctgcgatgtacaggtgctcattaccctcatc
tccagcgacaaagaagtaatgcccgatgccctggcatgcctggccgcttctgccgcactc
gcagtttcagatattcccattaaagaagttatttctcaggtacgcgtagcgcgtatcgat
ggaaactttgtggttaacccaagccgtacagaactcgctactgccgatatggatttcctg
atcgcagctaccgataagaacctgatgatggtggaaggtgaatccaaggaatgtagtgaa
gaagacctcgtaaaagcattggaaatcgcccacgaagctatccgcctccagatcaaagcc
cagatagaactccgcgacaaagcaggtgttactggtaaacgtgaatataccaagcctgtt
gtaaacgaagaactgcgtgaaaaagtcgctgcttttacaaaagataagatctatgccatc
gctaaaagcgcttctgccaagcacgatcgcagcgatgcttttgataagctgaaaaaagaa
ctgatcgaaagcctcggcgaagaagtggaagacagcactaaaaagctggctaaaaaatat
tacgaagacctgcagtgggaactggtacgtgacatgatgatcaatgatcgtgtacgtctt
gacggccgtaagctggatcaggtgcgtggcctggccatggagatcgatccattgccctct
ccgcacggttctgctttgtttacccgtggtgaaacacaatcgctcactaccgttacattg
ggtacgccactcgatgaactgctggtagaaagcgctgccaattcagaatacaccaagttc
atcctgcattataacttcccgccattctctaccggtgaagtaaagatgatgcgtggacca
ggccgtcgggaggttggtcacggtaacctcgccatgcgttcactgaagcaaatgatgcca
ggtaacgaatatccttacaccgtacgtatcgtaagtgatgtactcgaatcaaacggttcc
tcttctatggctactgtttgtgctggttcattggccctgatggatgccggtgtgccttta
cccaagcacgtgggtggtgtggcaatgggtcttgtaacccgtgcagcggacaacaaatat
gctatcctgaccgatatcctgggtgatgaagatcacctcggtgatatggacttcaaggta
accggtacacgcgaaggtatttgcggtgtacagatggatatcaagatcgatggtcttagc
atggatacgatgcgtgaagcattggagcaagcccgtaaaggccgcttacacatcctcgaa
gccatgtacgaatgtatcccggctgcccgtgaggaagtgaaaccacatgcacctcgtatg
gagaaactgttcattgataaagaatttatcggtgcagtgatcgggccacagggtaagatc
atccaggagatccaacgcgaaacaggtactaccatcaatattgaagaagtaggcaactac
ggtgaagtaagcgtattcagccctgccaaagaaggtctggataaagcagtagcctggatc
aaaggcattaccgccatgcctgaagtaggatcagtatacgaagctaccgttaaaggcatt
aaggaattcggtgcattcgttgagttcctgcctggtaaacaaggtttgttgcacatcagc
gaaatttcccacaagcgcctggagaccatggaaggcgtattgaaggaaggtgagaaggta
aaagtgaagctgatcggtatcgaccacaagaccggtaagttcaaattgagccgtaaagta
ttaatgcccaaacccgatggcgccccaaggtctccacagggtaatggcgctgccccacag
cagtaa
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