Paraflavitalea soli: D3H65_22745
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Entry
D3H65_22745 CDS
T05640
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
pseg
Paraflavitalea soli
Pathway
pseg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pseg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
D3H65_22745 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pseg03019
]
D3H65_22745 (recQ)
03400 DNA repair and recombination proteins [BR:
pseg03400
]
D3H65_22745 (recQ)
Enzymes [BR:
pseg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
D3H65_22745 (recQ)
Messenger RNA biogenesis [BR:
pseg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
D3H65_22745 (recQ)
DNA repair and recombination proteins [BR:
pseg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
D3H65_22745 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
RQC
Helicase_C
RecQ-1-like_HTH
RecQ_Zn_bind
HRDC
HTH_40
Motif
Other DBs
NCBI-ProteinID:
AXY76641
UniProt:
A0A3B7N2V1
LinkDB
All DBs
Position
5989391..5991685
Genome browser
AA seq
764 aa
AA seq
DB search
MGTTTKKTASKTEKASKNGAVKKNGTAKSNGTITGSYLHEALQEHFGFKGFKGNQEAIIK
SLLSGKDTFVIKPTGGGKSLCYQLPAMISEGVAIIVSPLIALMKNQVDLVRSYSSKDDVA
HFLNSTLSKKEIREVQEDLLTGRTKMLYVAPETLTKQENLEFFAELKISFFAVDEAHCIS
EWGHDFRPEYRRLREMMTQINPDIPVIALTATATPKVQSDIIKNLDLRDPSVYISSFNRP
NLYYEIQPKIKKDITIKNIVRFIVQMKGRSGIIYTLNRKTTEELADMLMANGIKAVAYHA
GLDSKLRAERQDLFLNEDVQVIVATIAFGMGIDKPDIRFVIHYNIPKSIENYYQETGRAG
RDGLEGKCILYYSHKDVAKLEHLMRDKPLSEREVGAQLINETVAYAESGVCRRKVLMSYF
GEEYTDKNCGECDNCLHPKEEIEAKDNAVKVLKTVKALDERFATDYTVNIIIGRLTPNIS
MFRHEGMAEFGIGKDEPDHYWSTLIRQLLLSGLLSKEIEDYGVLKITKAGEAFAKKPKSF
KIILNNLYEEANADDDEGAENPTGTAATDEKLFEMLKELRQKEAKKKALPPFVIFLETSL
QDMATLYPTTLQELEKCSGVSKGKALRYGKPFIEMVARYVQENNIERPDDFVMKSVVNKS
GNKVYIIQQTDKKIPLETIAKNKSWRMDEMLEEMETIAASGTKLNLDYAIDEMLDEHEQD
EILDYFKSCETSSLQVAQEELSDGNYTWEQLKIMRIKFLAQYGM
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atgggaacaacaaccaagaaaacggcatcgaagacagaaaaagcatctaaaaacggcgct
gttaaaaagaatgggactgccaagtccaacggtaccattaccggttcttacctgcacgaa
gcattgcaggaacacttcggcttcaaaggctttaaaggcaaccaggaagctatcattaaa
agtttattaagcggcaaagatacttttgttatcaaacctacgggaggtggcaaaagctta
tgttatcagttaccggccatgatcagcgagggagtggccatcattgtaagccccctgatc
gcgctgatgaaaaaccaggtagacctggtacgcagctacagcagcaaagatgatgtagcg
cattttctcaactctactttaagcaaaaaggagatccgggaagtacaggaagacctgttg
accgggcgcaccaagatgttgtacgttgctcctgaaacgctcaccaaacaggagaatctt
gaattttttgccgaacttaaaatatctttcttcgccgtggatgaggcccattgtatttcc
gagtggggccatgatttccgtcctgaataccggagactgcgggagatgatgacacagatc
aacccggatattccggtgatcgcgcttacggccacggcaactcccaaagtacagagtgat
attatcaagaacctcgatctgcgggatccctccgtttatatatcttccttcaaccggccg
aacctctactatgagatccagcccaagatcaagaaagacataacgatcaaaaacattgta
cgcttcatcgttcagatgaagggtagaagcggtattatctatacattgaaccgcaaaacc
acggaagaattggcagatatgctgatggccaatggcatcaaggctgtggcgtatcatgcg
ggattggatagcaaattgcgggctgaacgccaggacctgttcctgaatgaagatgtacag
gtaattgtggctaccattgcctttgggatggggattgacaagccggacatccgttttgtg
atccactataatattcctaaaagcattgaaaactattaccaggaaaccggccgtgcaggg
cgcgacggattggaaggaaagtgtattctctattattcccataaagacgtagccaagctg
gagcacctcatgcgcgacaagccgctgagtgaacgcgaggtgggagcccagttgatcaac
gagacggtggcttatgctgaaagtggtgtttgccgtcgtaaggtgttgatgagttatttt
ggagaagagtataccgataagaactgcggagagtgcgataactgtctgcatccgaaggaa
gaaatagaggccaaagacaatgcggtgaaggtattgaagaccgtgaaagccctggatgaa
cgttttgcaacagattacaccgtaaatattataataggccggcttacccccaatatcagc
atgttccgtcatgaaggtatggccgagtttggcattggtaaagatgagccggatcattac
tggagtacgttgatccgacagttattgctgtcaggattattgagcaaggagatcgaagat
tatggagtattgaagatcaccaaggccggggaagcatttgcgaagaagcccaaatcattc
aagatcattctcaacaacctctatgaagaagccaatgcagatgatgatgagggggctgag
aatcctaccggtacggcagctacggatgagaagttgtttgagatgttgaaagaactcagg
caaaaagaggcgaagaaaaaagcattgcctccttttgtgatcttcctggagacttcctta
caggatatggctactttgtatcctactaccttgcaggagctggaaaaatgctctggcgta
agcaagggcaaggccctgcgttatggaaaacctttcatagaaatggttgccaggtatgtg
caggagaataatatcgagcggccggatgattttgtgatgaagagtgtggtcaacaagagt
ggtaataaagtatacatcattcagcaaaccgataagaagatcccgctggagaccattgct
aagaataaaagctggcggatggatgagatgctggaagagatggaaaccattgcagccagc
ggcaccaagctcaacctggattacgcgattgatgaaatgctggacgagcacgagcaggac
gagatactggattatttcaaaagctgtgaaacatcctccttacaggtagcgcaggaagaa
ttgagtgacgggaattacacctgggagcagttgaagatcatgcgcattaagttccttgcc
caatatggtatgtag
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