Paraflavitalea soli: D3H65_24095
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Entry
D3H65_24095 CDS
T05640
Name
(GenBank) RNA polymerase sigma-70 factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
pseg
Paraflavitalea soli
Pathway
pseg02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pseg00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
D3H65_24095
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pseg03021
]
D3H65_24095
Transcription machinery [BR:
pseg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
D3H65_24095
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
HTH_23
HTH_5
DUF4435
GerE
HTH_28
HTH_17
HTH_10
HTH_3
HTH_11
MerR
PhyR_sigma2
Xre-like-HTH
DUF134
Motif
Other DBs
NCBI-ProteinID:
AXY76882
UniProt:
A0A3B7MQW2
LinkDB
All DBs
Position
6295125..6295697
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AA seq
190 aa
AA seq
DB search
MSKLANIKEIQRRIALYDDEVAYKELFCLFYKPLLRFAYTFCHAHEMAEEIVSDVFISIW
QRRSHLDDINNLKVYLYISTKNMALKYLLKQQKQVSITIDDLQVELESQYNNPEQLMMTA
EMLARVEQAITHLPPRCKLVFKLIKEDGLRYKEVAEILGISVKTIDNQLAIALGKIGKAL
NVNLKKIVRF
NT seq
573 nt
NT seq
+upstream
nt +downstream
nt
atgtctaagcttgctaatatcaaggaaatacagcgtcgtatagccttatatgacgacgaa
gttgcttataaagagctgttctgtctcttttataagcccctgctccggtttgcgtatacc
ttttgtcatgcccatgaaatggccgaagagatcgtttcagatgtttttatcagcatatgg
cagcgccgctcccacctcgacgacatcaataacctcaaagtatacctctatataagtacc
aaaaatatggccctgaaatacctgctcaaacagcaaaagcaggtgtctattaccatcgac
gatctccaggtagagctggaaagccagtataataatcccgaacagctcatgatgaccgcc
gaaatgctggcccgggtagaacaggccattacccaccttcccccccgttgtaaattggtc
tttaaactcattaaagaagacggcctgcggtataaagaggtagccgaaatccttggcatc
tctgtcaaaaccattgacaaccagctggctatagcccttggcaagatcggcaaggccctc
aatgtaaacctcaaaaagatcgttcgcttctaa
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