KEGG   Pseudonocardia sp. HH130629-09: XF36_00105
Entry
XF36_00105        CDS       T04082                                 
Name
(GenBank) ABC transporter
  KO
K02052  putative spermidine/putrescine transport system ATP-binding protein
Organism
pseh  Pseudonocardia sp. HH130629-09
Pathway
pseh02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:pseh00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    XF36_00105
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:pseh02000]
    XF36_00105
Transporters [BR:pseh02000]
 ABC transporters, prokaryotic type
  Mineral and organic ion transporters
   Putative spermidine/putrescine transporter
    XF36_00105
SSDB
Motif
Pfam: ABC_tran AAA_21 TOBE_2 AAA AAA_22 AAA_16 AAA_25 Rad17 AAA_28 nSTAND1 ABC_ATPase AAA_5 ORC-CDC6-like SMC_N nSTAND3 RsgA_GTPase NACHT nSTAND_NTPase5 AAA_29 AAA_14 SRP54 TsaE NB-ARC ATPase_2 AAA_30 NPHP3_N AAA_19 ATP-synt_ab NTPase_1 MobB
Other DBs
NCBI-ProteinID: ALE81712
LinkDB
Position
26032..27051
AA seq 339 aa
MVGLSGVSRDFGAGPVVDDLDLSVRRGEFLALLGPSGCGKTTLLRMIAGYLEPTAGRVTI
NGTDATRMPVRRRNIGMVFQSYALFPHLSVAENVAFGLRMRKVGRVERDRRVHEALDLVG
LAHLGGRRPAELSGGQQQRVALARAVVVRPDVLLLDEPLSNLDARLRVQLRDELARVQRE
TGLTTVLVTHDQEEALAVADRIVLLDRGRVAQEGTPREVFERPRTRFVAEFLGYRNVLDL
PGRGRVAIRPEHVRVHPDGGAADAAPGDARDVVVLDGTMRSSTYRGTYSTATAVVPTDGG
EAEVQGVTGMPEPAPGDRVRVELPVSAIVSLEADPEEVL
NT seq 1020 nt   +upstreamnt  +downstreamnt
gtggtgggactgtccggcgtcagtcgcgacttcggagcgggcccggtcgtggacgacctc
gacctgtcggtgcgacggggcgagttcctggcgctgctcggacccagcggctgtggcaag
accactctgctgcgcatgatcgccggctacctggagcccaccgcgggtcgggtgacgatc
aacggtacggacgccacccggatgccggtccgccgtcgcaacatcggcatggtcttccag
tcctacgcgctgttcccgcacctgagcgtggcggagaacgtcgcgttcgggctgcggatg
cgcaaggtcggccgcgtcgaacgggaccggcgggtgcacgaggcgctggacctggtcgga
ctcgcgcacctcggcgggcgccgcccggccgagctgtccggtggccagcagcagcgggtc
gcgctcgcccgcgccgtcgtcgtgcgtccggacgtgctgctgctcgacgagccgctgtcc
aacctcgacgcgcggctgcgggtgcagcttcgcgacgagctcgccagggtgcagcgcgag
accggcctgaccaccgtgctggtcacgcacgaccaggaggaggcgctggccgtcgccgac
cgcatcgtgctgctggaccgcggccgggtcgcgcaggagggcacgccacgggaggtcttc
gagcggccccgcacccggttcgtagccgagttcctcggctaccgcaacgtcctcgacctc
cccgggcgcggtcgcgtcgcgatccggcccgagcacgtgcgggtgcaccccgatggcggg
gccgccgacgcggcccccggcgacgcccgcgacgtcgtcgtcctcgacgggacgatgcgc
tcgtcgacctaccgcgggacctacagcaccgccaccgccgtcgtcccgacggacgggggc
gaggccgaggtgcagggcgtcaccggcatgcccgaaccggcccccggtgaccgggtccgg
gtggagctgccggtgtccgcgatcgtgagtctggaagccgaccccgaggaggtcctgtga

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