Pseudonocardia sp. HH130629-09: XF36_00105
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Entry
XF36_00105 CDS
T04082
Name
(GenBank) ABC transporter
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
pseh
Pseudonocardia sp. HH130629-09
Pathway
pseh02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pseh00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
XF36_00105
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pseh02000
]
XF36_00105
Transporters [BR:
pseh02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
XF36_00105
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
TOBE_2
AAA
AAA_22
AAA_16
AAA_25
Rad17
AAA_28
nSTAND1
ABC_ATPase
AAA_5
ORC-CDC6-like
SMC_N
nSTAND3
RsgA_GTPase
NACHT
nSTAND_NTPase5
AAA_29
AAA_14
SRP54
TsaE
NB-ARC
ATPase_2
AAA_30
NPHP3_N
AAA_19
ATP-synt_ab
NTPase_1
MobB
Motif
Other DBs
NCBI-ProteinID:
ALE81712
LinkDB
All DBs
Position
26032..27051
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AA seq
339 aa
AA seq
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MVGLSGVSRDFGAGPVVDDLDLSVRRGEFLALLGPSGCGKTTLLRMIAGYLEPTAGRVTI
NGTDATRMPVRRRNIGMVFQSYALFPHLSVAENVAFGLRMRKVGRVERDRRVHEALDLVG
LAHLGGRRPAELSGGQQQRVALARAVVVRPDVLLLDEPLSNLDARLRVQLRDELARVQRE
TGLTTVLVTHDQEEALAVADRIVLLDRGRVAQEGTPREVFERPRTRFVAEFLGYRNVLDL
PGRGRVAIRPEHVRVHPDGGAADAAPGDARDVVVLDGTMRSSTYRGTYSTATAVVPTDGG
EAEVQGVTGMPEPAPGDRVRVELPVSAIVSLEADPEEVL
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
gtggtgggactgtccggcgtcagtcgcgacttcggagcgggcccggtcgtggacgacctc
gacctgtcggtgcgacggggcgagttcctggcgctgctcggacccagcggctgtggcaag
accactctgctgcgcatgatcgccggctacctggagcccaccgcgggtcgggtgacgatc
aacggtacggacgccacccggatgccggtccgccgtcgcaacatcggcatggtcttccag
tcctacgcgctgttcccgcacctgagcgtggcggagaacgtcgcgttcgggctgcggatg
cgcaaggtcggccgcgtcgaacgggaccggcgggtgcacgaggcgctggacctggtcgga
ctcgcgcacctcggcgggcgccgcccggccgagctgtccggtggccagcagcagcgggtc
gcgctcgcccgcgccgtcgtcgtgcgtccggacgtgctgctgctcgacgagccgctgtcc
aacctcgacgcgcggctgcgggtgcagcttcgcgacgagctcgccagggtgcagcgcgag
accggcctgaccaccgtgctggtcacgcacgaccaggaggaggcgctggccgtcgccgac
cgcatcgtgctgctggaccgcggccgggtcgcgcaggagggcacgccacgggaggtcttc
gagcggccccgcacccggttcgtagccgagttcctcggctaccgcaacgtcctcgacctc
cccgggcgcggtcgcgtcgcgatccggcccgagcacgtgcgggtgcaccccgatggcggg
gccgccgacgcggcccccggcgacgcccgcgacgtcgtcgtcctcgacgggacgatgcgc
tcgtcgacctaccgcgggacctacagcaccgccaccgccgtcgtcccgacggacgggggc
gaggccgaggtgcagggcgtcaccggcatgcccgaaccggcccccggtgaccgggtccgg
gtggagctgccggtgtccgcgatcgtgagtctggaagccgaccccgaggaggtcctgtga
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