Pseudonocardia sp. HH130629-09: XF36_03640
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Entry
XF36_03640 CDS
T04082
Name
(GenBank) RNA polymerase sigma factor
KO
K03090
RNA polymerase sigma-B factor
Organism
pseh
Pseudonocardia sp. HH130629-09
Brite
KEGG Orthology (KO) [BR:
pseh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pseh03021
]
XF36_03640
Transcription machinery [BR:
pseh03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
XF36_03640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
KORA
DUF7343
Sigma70_ECF
HTH_3
HTH_23
HTH_AraC
HTH_Crp_2
DUF3577
HTH_24
YidB
Motif
Other DBs
NCBI-ProteinID:
ALE82340
UniProt:
A0A0M4QEZ7
LinkDB
All DBs
Position
complement(756901..757677)
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AA seq
258 aa
AA seq
DB search
MTVDPQYAHLTPLLEQYAGLDDGDPRRERLREQLVTGYLPVAQHIARRFNHRGEPLDDLV
QVATVGLINAIDRFDPEKGGEFFSFAVPTISGEVRRHFRDQSWSMRVPRRLKDMHVSING
AVSELSQTLGRAPRPSELAEYLDLPVGEVLEGLEAAEAYRSSSLDEMLSSENGSATVGEL
VGDADAELDRVDYRESLRPLLAELAPRERTIVMLRFFGNRTQTQIAQEVGISQMHVSRLL
AQTLSRLRNRLDPDDRTF
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
gtgacggtggacccccagtacgcccacctcaccccgctgctcgagcagtacgcgggcctc
gacgacggcgatccccgccgggagcggctgcgcgagcagctcgtcaccggctacctgccc
gtcgcccagcacatcgcccgccggttcaaccaccggggcgagcccctcgacgacctcgtg
caggtcgcgacggtcgggctgatcaacgccatcgaccggttcgacccggagaagggcggc
gagttcttctccttcgccgtgcccacgatctccggtgaggtgcgccggcacttcagggac
cagagctggtcgatgcgggtaccgcgacggctcaaggacatgcacgtgtcgatcaacggc
gcggtgtccgagctgtcccagaccctcggtcgcgcgccccggccctcggagctcgcggag
tacctcgacctgcccgtcggcgaggtactggagggcctggaggccgccgaggcctaccgc
agctcctcgctcgacgagatgctgtcgtcggagaacggcagtgcgaccgtgggcgagctg
gtcggcgacgccgacgccgagctcgaccgggtcgactaccgcgagtcgctgcgcccgctg
ctcgccgagctcgcgccacgggagcggacgatcgtgatgctccggttcttcggcaaccgc
acccagacccagatcgcccaggaggtcggcatctcccagatgcacgtctcccggctgctc
gcacagaccctgtcgcggctgcgcaaccggctcgacccggacgaccgcaccttctga
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