Pseudonocardia sp. HH130629-09: XF36_04635
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Entry
XF36_04635 CDS
T04082
Name
(GenBank) ATPase
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
pseh
Pseudonocardia sp. HH130629-09
Brite
KEGG Orthology (KO) [BR:
pseh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pseh03400
]
XF36_04635
DNA repair and recombination proteins [BR:
pseh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
XF36_04635
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
HerA_C
DUF87
AAA_22
TrwB_AAD_bind
FtsK_SpoIIIE
CbiA
ResIII
AAA_16
AAA
AAA_30
T2SSE
AAA_6
Zeta_toxin
AAA_7
Motif
Other DBs
NCBI-ProteinID:
ALE82517
UniProt:
A0A0M4PYP4
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Position
973245..974804
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AA seq
519 aa
AA seq
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MADDTPARTIAAGYATDGAALELGTVLVDGVCDPQARVRIPLATLNRHGLVAGATGTGKT
KTLQALAGQLSDAGVPVLLADVKGDLSGMARPGEPNDKVTARATDAGDDWVPTAYPVQFL
SLGDGGVAVPVRATLTQFGPILLAKVLGLNATQESTLGLIFHWADQRGLPLLDTKDLRAV
ITHLTSDEGKADLKGIGGVSPATAGVILRALVNLEAQGGEEFFGEPEFDPADLMRQVDGK
GVVTLLELAERAANPVLFSTFLMWLLAELYEELPEAGDLDRPELVFFFDEAHLLFTDASK
AFLDRIEQTVKLIRSKGVGVFFCTQLPTDVPNEVLSQLGARIQHALRAFTPDDQKALSRT
VRTYPKSEVYDLESALTSLGTGEAIVTVLSERGAPTPVAWTRLRAPRSLMAALPVDDVRA
DAAASPLQAKYGQMVDRESAYEKLTASIAAGPGGEATPVGAPAPAPEPGQAPPPPPQDSS
GGGIFSKIGDFLQSPTGRQLTNTVTREITRSLFGTRRRR
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
gtggctgacgacacacccgctcgcaccatcgccgccggatacgccaccgacggggccgcg
ctggagctcggcaccgtcctcgtcgacggcgtgtgcgacccgcaggcaagggtccggatc
ccgctcgcgacgctgaaccggcacggcctggtggccggggcgaccggcaccggcaagacg
aagacgctgcaggcgctggccgggcagctctccgatgccggggtcccggtcctgctcgcc
gacgtcaagggcgacctgtccggcatggcccggccgggtgagccgaacgacaaggtcacc
gcccgcgcgaccgacgccggcgacgactgggtcccgaccgcgtacccggtgcagttcctg
tccctgggcgacggcggcgtcgccgtcccggtgcgggcgacgctgacccagttcggcccg
atcctgctggcgaaggtgctcggcctcaacgccacccaggagtccaccctcggcctgatc
ttccactgggccgaccagcgcgggctgccgctgctcgacaccaaggacctgcgcgcggtc
atcacgcacctcacctccgacgagggcaaggccgacctcaagggcatcggcggggtctcc
ccggcgacggcaggggtcatcctgcgcgcactggtcaacctggaggcccagggcggcgag
gagttcttcggcgagcccgagttcgatcccgcggacctgatgcgtcaggtcgacgggaag
ggtgtcgtcacgctgctggagctggccgaacgcgccgcgaacccggtgctgttctccacg
ttcctgatgtggctgctcgccgagctgtacgaggagctgcccgaggcgggtgacctggac
cggcccgagctggtcttcttcttcgacgaggcgcatctgctgttcaccgacgcctcgaag
gcgttcctcgaccgcatcgagcagaccgtcaagctcatccggtccaagggcgtcggggtg
ttcttctgcacccagctgcccaccgacgtgccgaacgaggtgctgtcccagctcggcgcg
cggatccagcacgcgctgcgggccttcaccccggacgaccagaaggcgttgtcgcgcacg
gtgcggacctatccgaagtccgaggtctacgacctggagtcggcgctgacctcgctgggc
accggtgaggcgatcgtcacggtgctgtccgagcgcggcgcgcccacaccggtcgcctgg
acccggctgcgggccccgcgctcgttgatggccgccctgcccgtcgacgacgtccgcgcc
gacgccgccgcctcgccgttgcaggcgaagtacggacagatggtggaccgcgagtcggcc
tacgagaagctcaccgcgagcatcgcggccggaccgggtggcgaggcgacgccggtcggg
gcgcccgcccccgctccggagccgggccaggccccgccgcccccgccgcaggactcgtcg
ggcggcgggatcttctccaagatcggggacttcctgcagtcgccgaccggtcgtcagctc
acgaacacggtgacccgggagatcacccgcagcctgttcgggacccgccggcgtcgctga
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