Pseudonocardia sp. HH130629-09: XF36_06715
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Entry
XF36_06715 CDS
T04082
Name
(GenBank) hypothetical protein
KO
K19720
collagen type III alpha
Organism
pseh
Pseudonocardia sp. HH130629-09
Pathway
pseh04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pseh00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
XF36_06715
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
pseh00536
]
XF36_06715
Glycosaminoglycan binding proteins [BR:
pseh00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
XF36_06715
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cytochrom_D1
YNCE
PQQ_2
Lactonase
Glu_cyclase_2
Motif
Other DBs
NCBI-ProteinID:
ALE82879
UniProt:
A0A0M3UAS6
LinkDB
All DBs
Position
complement(1501809..1505270)
Genome browser
AA seq
1153 aa
AA seq
DB search
MHPTAAERMTSAPGHPGPDDRSPRRADGPPGPDPNPDGLGEAIRTGRVPVVPGSLVDLVM
RSGSGEEPEQEATSEDDGARREPTPTGFTELVSRDGGPVPSARPTPGPRPAAPEPPSDAG
DYADLGDLGDDPLGVGPLPDEPGDDGLDPLHTPADRFAPPPSFAPDSPDGPTTATDGAPT
PSRPGPVDTAQPDPQPGPSDSSRAEDAPSGPAPEAGSPVTGTGGDRPDPVATPAEGGRRT
DAGPGPDGVPVTEPAPTVVPPIAPTPRPLGDDTRPAAGPTPNQDPTPSPSAGDSTGSGAT
GSDDEGRDTGEQHTAKRWPPRPARGSADGPETDILPPGALIGHYPNTDSTDGRAEQPPAR
PSTPPSGSRPTMPGHRPPAPAGPERRQAPRPAMGGVPSGPAMAGLSGNDLFATVGGDPGS
GFGQLPSRADDPQDSRTDGAVATPDAERPSPDDLDRADSLRDDSVRDDSVRDESVRDASV
PRGDVPGPAAGAFSGRARTGAFPGLGTGPDERPGGPGTSGYPDGRPGGPGTNGHPDGRPD
GHGTNGYTDGRPGGPGTGAYPAGRPERQGAGRSLADRAGGQGTGTYPVGRPGGQGPGPYP
TDRPGGPGTGGRPGGPGTAVHPPHGPGAPGTGTFPAGGGPRPARRDPGARSWAPAPDRPG
PAGPDGRTAARPDPAADTETTVVLRAVGTDEPPTLRGLTPTTGHPEAPAPADGTAGPSDP
DQPDAATTSRNAAAAASVGAVSVAAARAASGRDGTVDDTGQSTAVQPAAAEAAATGDKPV
TPRHEAIMSAKPRNGRRSPSAAGLAIALAIVLLGALTLWAMLSPSTSTPGANATRPAVSA
GPGTGPRPEVAAAGTSLAQPTVRATVQVPGAPVAVAAAPDGATALVAVRDASRLAVVDTA
TDAVTGEIGLPAAPQGLVTSPDGTRAYVSTGGPGGGQIAVVDVPGRTVVGTAAVGGDPGA
ASVSPDGRFLYVPSRTDGTVQELDPNAGTMTRTVPVSRDPYAGATNAAGDRVYLATRGAD
QLTVLDPDSLTVLGSFPVRGGAESLAVSPASVPRTMVAVGGPESGTVMVLDPADGREIAT
VQVDGGATGMAFAPDGRHLYVATRQGLVTVDTGTWQVTGTTDVAPNPTGVAVAPDGRTGW
VTGDGAVSVLNLT
NT seq
3462 nt
NT seq
+upstream
nt +downstream
nt
gtgcacccgaccgccgcagaacgcatgacgtcggcgcccggtcacccgggccccgacgac
cgctccccccggcgtgccgacggcccgccgggccccgatccgaaccccgacgggctcggc
gaggcgatccggaccggccgcgtgccggtggtccccggctccctggtcgatctggtcatg
cggtcgggctcgggggaggaaccggagcaggaggccacgtccgaggacgacggcgcccgg
cgcgagccgaccccgacgggcttcaccgaactggtgtcccgcgacggcggtcccgtgccc
tcggcacgtccgaccccgggaccgcggcccgccgcccccgaaccgccgtcggatgcgggt
gactacgccgatctcggcgacctcggcgacgacccgttgggcgtcgggccgctgcccgac
gaacccggcgacgacggtctcgaccccctgcacaccccggcggaccgcttcgccccgccg
ccgtcgttcgcgccggactcaccggacgggccgacgaccgcgacggacggcgctccgacg
ccgtcccggcccggtccggtggacactgctcagcctgatccccagcccggtccgtcggac
tcctcccgggcggaggacgccccgtcgggtcccgcgccggaggcggggagccccgtcacc
gggacgggtggggaccggccggaccccgtcgccaccccggcggagggcggccgtcgcacc
gacgccggtcccgggccggacggtgtgccggtcaccgagcccgcaccgaccgtcgtcccc
ccgatcgcgcccaccccgcgaccgctcggcgacgacacccgccccgccgcgggccccacc
ccgaaccaggacccgacgccgtcgccctcggccggggacagcacgggctccggcgccacc
gggtccgacgacgagggccgggacaccggggaacagcacaccgcgaagcggtggccgccg
cgcccggcgcgcggcagcgccgacggcccggagaccgacatcctgccccccggcgcgctg
atcgggcactacccgaacacggactccaccgacggccgggccgagcagccgcccgcgcgg
ccctcgaccccaccgtccgggagccgtccgaccatgcccggccaccggccccccgccccc
gcgggcccggagcggcgtcaggcgccccgtccggcgatgggtggtgtcccgtccggtccg
gcgatggccggtctgtcgggcaacgacctgttcgccaccgtcggcggcgacccgggcagc
ggcttcggccagctcccgagccgcgccgacgacccgcaggactcccgcaccgacggcgcg
gtcgctacccccgacgcggagcgcccctcccccgacgacctcgaccgcgccgactccctc
cgggacgactcggtccgggacgactcggtccgggacgaatccgtccgagacgcctccgtt
ccccggggcgacgtcccgggcccggcagccggcgcgttctccggacgggcccggaccggg
gcgttccccggcctcgggacgggtccggacgagcggcccggcgggccgggcaccagcggg
tacccggacggtcgacccggcgggccgggaacgaacgggcaccccgacggtcggcccgac
gggcacggcacgaacgggtacaccgacggtcggcccggcgggccgggcaccggcgcgtac
ccggccggccggccggagcgacagggcgccggcaggtccctggccgatcgcgccgggggg
cagggcacgggcacgtaccccgtcggccgaccgggtgggcagggcccggggccgtatccg
accgaccggcccggcggcccggggaccggtggccgccctggcggacccggtaccgccgtc
cacccgccgcacgggcccggcgcccccggcaccggcacgttccccgcgggcggtggccca
cgccccgcccggcgcgaccccggtgcccgttcctgggcgcccgccccggaccgccccggc
ccagcaggaccggacggtcggaccgcagcgcgaccggaccccgcggccgacaccgagacc
accgtggtcctgcgggccgtcggcaccgacgagccgccgacgctgcggggcctcaccccg
accaccgggcacccggaggctccggccccggcggacggcacggccggtccgtcggacccg
gaccagccggacgcggcgacgaccagtcgcaacgccgccgccgcggcctcggtcggggcc
gtctcggtggccgccgcccgcgccgcgtccggccgggacggcacggtcgacgacaccggt
cagagcaccgcggtccagcccgcggccgcggaggccgcagcgaccggggacaagccggtc
accccgcgccacgaggcgatcatgtcggcgaagccgcgcaacggccgtcgcagcccgtcc
gcggccgggctcgcgatcgcactggcgatcgtgctcctcggcgcgctgaccctgtgggcg
atgctgtcgcccagcacgtccacaccaggtgcgaacgcgacccggccggccgtctcggcc
ggcccggggacgggaccgcggccggaggtggccgcggccgggaccagcctggcgcagcct
acggtgcgggcgaccgtgcaggtccccggcgccccggtcgccgtcgcggccgccccggac
ggcgcgacggcgctcgtcgcggtccgcgacgcgagccggctcgcggtcgtcgacaccgcg
accgacgccgtcaccggtgagatcgggctcccggcagcgccccaggggctggtgacgtcc
ccggacggcacccgtgcctacgtcagcaccggtgggccgggcggcgggcagatcgccgtc
gtcgacgtgccggggcggaccgtcgtcggcacggcggccgtcggcggggatcccggtgcg
gcctcggtctcccccgacggccggttcctctacgtgccgtcgcgcacggacggcaccgtg
caggagctcgacccgaacgcgggcaccatgacccgcacggtgccggtgtcgcgcgacccg
tacgccggtgccacgaacgccgcgggcgaccgcgtctacctcgccacccgcggcgccgac
cagctcaccgtgctcgacccggacagtctcaccgtcctcggcagcttcccggtgcgcggc
ggtgcggagtccctggccgtcagccccgcatccgtcccgcggaccatggtcgcggtcggc
gggccggagtccgggaccgtgatggtcctggaccccgccgacgggcgcgagatcgcgacc
gtgcaggtcgacggcggcgccaccggcatggctttcgcccccgacggccggcacctctac
gtcgcgacccggcagggtctcgtcaccgtcgacaccgggacctggcaggtcaccggcacc
accgacgtcgccccgaacccgaccggggtcgccgtcgcgcccgacggccggaccggctgg
gtcaccggtgacggcgcggtcagcgtcctgaacctgacctga
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