Pseudonocardia sp. HH130629-09: XF36_07555
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Entry
XF36_07555 CDS
T04082
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pseh
Pseudonocardia sp. HH130629-09
Brite
KEGG Orthology (KO) [BR:
pseh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pseh03016
]
XF36_07555 (truB)
Enzymes [BR:
pseh01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
XF36_07555 (truB)
Transfer RNA biogenesis [BR:
pseh03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
XF36_07555 (truB)
Prokaryotic type
XF36_07555 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
DKCLD
PUA
Motif
Other DBs
NCBI-ProteinID:
ALE83028
UniProt:
A0A0M4Q9D1
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All DBs
Position
1671148..1672044
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AA seq
298 aa
AA seq
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MPARNPPPPPGLVIVDKDRGPTSHDVVGKLRRIMGTRKVGHAGTLDPMATGVLVVGIERA
TKLLGHLSLDTKAYIATVRLGQGTDTDDAEGTPVGEPVPVGADDDAVSAAMAALTGEIMQ
VPSAVSAVKIDGKRAYQRVRDGETVEIPARPVTVSAFELLVVRRDGPWCDLDVAVDCSSG
TYVRALARDLGTALGSAGHLTALRRTRVGPFTLEHARTVEQLAEEPGLSLDLAAAVATAF
PRVDLDASAATDVRFGKSLPAAGIAGTYGVFAPDGAALALMADRGAAARPVVVLAPAG
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgcacgcaacccgcccccgccgcccggtctcgtgatcgtcgacaaggaccgaggc
ccgaccagccacgacgtcgtcgggaagctccgccggatcatgggcacccgcaaggtcggc
cacgccgggacgctggacccgatggcgaccggggtgctggtcgtcggcatcgagcgggcc
accaagctgctcgggcacctgtcgctcgacaccaaggcctacatcgcgaccgtgcggctc
gggcagggcaccgacaccgacgacgccgagggcacgcccgtcggcgagcccgtcccggtc
ggggccgacgacgacgccgtcagcgccgccatggccgcgctgaccggggagatcatgcag
gtccccagcgcggtgtccgcggtgaagatcgacggaaagcgcgcctaccagcgggtccgc
gacggcgagaccgtcgagatcccggcccgcccggtcaccgtgtcggccttcgagctgctc
gtggtgcgccgcgacggcccgtggtgcgacctcgacgtcgccgtcgactgctcctcgggc
acctacgtccgcgcgctcgcccgcgacctcggcaccgcgctgggctccgccgggcacctg
accgcgctgcggcgcacccgggtcggacccttcaccctggagcacgcgcgcaccgtcgag
cagctcgccgaggaacccgggctgtcgctggatctcgccgcggccgtcgcgacggcgttc
ccgcgggtcgacctcgacgcctccgccgccaccgacgtgcggttcggcaagtcactgccg
gcggccgggatcgcagggacctacggggtgttcgccccggacggcgccgcgctggccctg
atggccgaccgcggtgccgccgcccgcccggtcgtcgtgctcgccccggccggctga
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