Pseudonocardia sp. HH130629-09: XF36_08160
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Entry
XF36_08160 CDS
T04082
Name
(GenBank) geranylgeranyl pyrophosphate synthase
KO
K13787
geranylgeranyl diphosphate synthase, type I [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
pseh
Pseudonocardia sp. HH130629-09
Pathway
pseh00900
Terpenoid backbone biosynthesis
pseh00997
Biosynthesis of various other secondary metabolites
pseh01100
Metabolic pathways
pseh01110
Biosynthesis of secondary metabolites
Module
pseh_M00364
C10-C20 isoprenoid biosynthesis, bacteria
Brite
KEGG Orthology (KO) [BR:
pseh00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
XF36_08160
09110 Biosynthesis of other secondary metabolites
00997 Biosynthesis of various other secondary metabolites
XF36_08160
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
pseh01006
]
XF36_08160
Enzymes [BR:
pseh01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
XF36_08160
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
XF36_08160
2.5.1.29 geranylgeranyl diphosphate synthase
XF36_08160
Prenyltransferases [BR:
pseh01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
XF36_08160
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
ALE83133
LinkDB
All DBs
Position
complement(1798212..1799288)
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AA seq
358 aa
AA seq
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MDDALPQHVERVLAGYLDRRRAEVAGIDTVVVQAADALAGFVLGGGKRLRPTFAWWGWRG
AGGDPADPHAHGVLSAIASLELIQACALVHDDLMDASSTRRGRPTVHVEFARMHAANGWS
GTPARFGAAVAILVGDLAQVWADDMFHAAPLPEGAHTRAAEPWRAMRTEVLSGQYLDVLA
QASGDTAESTALTIDRFKTAAYTVERPLHLGAAIAGADPRVVAAYRRYGADIGVAFQLRD
DLLGVFGDPRVTGKPAGDDLREGKRTLLVAAALQRAEQRGDRAAADVVLAALGDPDLDAA
SLDRARSALSELGAVQSVEQRIAALTGAALDALDSAPVAEPGRSHLFELAERATRRAW
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
ctggacgacgcgctgccccagcacgtggaacgggtgctggccgggtacctggaccgccga
cgcgccgaggtggcgggcatcgacacggtcgtcgtccaggccgccgacgcgctggccggg
ttcgtcctgggcggcgggaagcggctgcggcccaccttcgcctggtggggctggcgcggc
gcgggtggcgacccggccgacccgcacgcccacggcgtgctgagcgcgatcgcgtcgctg
gagctgatccaggcgtgcgcactggtccacgacgacctgatggacgcctcctccacccgg
cgcggccggccgacggtgcacgtcgagttcgccaggatgcacgcggcgaacggctggtcg
ggcacgccggcccggttcggcgccgccgtcgcgatcctcgtcggggacctggcccaggtg
tgggccgacgacatgttccacgccgccccgctgcccgagggcgcccacacccgcgccgcc
gagccgtggcgggcgatgcgcaccgaggtgctgtccggccagtacctcgacgtgctggcg
caggcctccggggacaccgcggagtcgaccgcgctgaccatcgaccgcttcaagaccgcc
gcctacaccgtggagcggccgctgcacctgggcgcggcgatcgccggggccgacccgcgg
gtcgtcgcggcctaccggcgctacggcgccgacatcggcgtcgcgttccagctgcgcgac
gacctgctcggcgtgttcggcgacccccgggtcaccggcaagcccgccggggacgacctg
cgcgagggcaagcggaccctgctggtcgccgcggccctgcagcgggccgagcagcgcggg
gaccgggccgccgccgacgtcgtcctcgccgcgctcggcgaccccgacctggacgccgcg
agcctggaccgggcccgctccgcgctgtccgagctgggcgcggtgcagtcggtggagcag
cggatcgccgccctcaccggcgccgcgctcgacgcgctcgactccgcaccggtcgccgaa
ccgggccggtcgcacctgttcgagctggccgagcgcgccacccgacgggcctggtga
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