Pseudonocardia sp. HH130629-09: XF36_11315
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Entry
XF36_11315 CDS
T04082
Name
(GenBank) primosome assembly protein PriA
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
pseh
Pseudonocardia sp. HH130629-09
Pathway
pseh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pseh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
XF36_11315
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pseh03400
]
XF36_11315
Enzymes [BR:
pseh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
XF36_11315
DNA repair and recombination proteins [BR:
pseh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
XF36_11315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
GAP1-M
Motif
Other DBs
NCBI-ProteinID:
ALE83671
UniProt:
A0A0M4R769
LinkDB
All DBs
Position
complement(2461730..2463835)
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AA seq
701 aa
AA seq
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MSSPRPAPATRTRRPGRNRGEWQPAAVRPVARVLVDVALPHLDRTFDYRVPTHLDDAAVP
GVRVRVRFAGRLVDGFLLERSDDTAHAGWLAWVDKVVSPEPVLTAEVAGLARAVADRYAG
VMADVLRLAVPARHARVESETPRERDTTDPAPVDRAGWEAYPRGGAFLDALAGGRAAHAV
WQALPGEEWAARLAEAAVATRSAGRSALLVVPDQRDVARLHAACAALLGEAGVVALTAEL
GPAERYRRWLAVRRGSVRVVVGTRSAAFAPLGELGLLAVWDDGDDSQSEPRAPYPQVRDV
LVLRAHREGAALLLAGFARTAEAQVLVETRWASSVAADRATVRARMPRVTAIGETDTQLV
RDPAARAARVPGVAFEAARAALSAGRPVLVQVPRSGYLPFLACASCRDAARCRHCAGPLG
LPRSGAGSEGALPACRWCGRAEPAFRCGHCGSRRLRAGVVGAGRTAEELGRAFPGVTVRT
SGGGAEVLDTVPAGPALVVATPGAEPVVEGGGGAGYGAALLLDGWAMLARPDLRVAEETL
RRWFAAAAGVVPHTDGGRVVVVAEASLPTVQALVRWDPAGHAEAELAERAEVGFPPAVRM
ASVEGPPATVAEICDAVLGTGRVDPSPPEGVEVLGPVEIDPPDRPGAGHGAADEVRERAL
LRVPRRAGRDLARALHDAQALRTARKAPETVRVRLDPDEID
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
gtgagctctccgcgtccggccccggcgacccgcacccgccgcccggggcgcaaccgaggg
gagtggcagcccgccgcggtccgtccggtcgcgcgggtgctggtcgacgtcgcgctcccg
cacctggaccggaccttcgactaccgcgtcccgacccatctcgacgacgccgccgtcccc
ggcgtgcgggtgcgggtgcggttcgccggccggctggtcgacggcttcctgctggaacgc
tccgacgacacggcccacgccgggtggctcgcctgggtcgacaaggtcgtctcgcccgaa
ccggtgctcaccgccgaggtggcgggcctggcccgcgccgtcgccgaccgctacgccggg
gtgatggccgacgtcctgcgcctcgcggtgccggcccggcacgcccgcgtcgagtccgag
accccgcgcgagcgcgacacgaccgaccccgccccggtggaccgggcgggctgggaggcc
tacccgcgcggcggcgccttcctcgacgcgctggcgggcggacgtgccgcgcacgccgtc
tggcaggcgctgccgggggaggagtgggcggcccggctggccgaggccgccgtcgccacc
cggtcggccgggcgctcagcgctgctcgtcgtccccgaccagcgcgacgtcgcccggctg
cacgcggcgtgcgccgcactgctcggcgaggccggcgtggtggccctgaccgcggagctc
gggccggccgagcgctaccggcgctggctggcggtgcggcgggggagtgtgcgggtcgtc
gtcggcacccggtccgcggcgttcgccccgctcggcgagctgggcctgctggccgtgtgg
gacgacggcgacgactcccagtccgagccccgcgccccctaccctcaggtccgcgacgtg
ctggtgctgcgcgcgcaccgcgagggcgccgcgctgctgctcgccgggttcgcccgcacc
gccgaggcccaggtgctcgtcgagacccgctgggcgagttcggtcgcggccgaccgcgcc
accgtgcgggcccggatgccgcgggtcaccgcgatcggcgagaccgacacccagctcgtg
cgcgacccggccgcccgcgccgcccgggtccccggcgtcgcgttcgaggccgcccgcgcc
gcgttgagcgccggccgcccggtgctggtgcaggtgccgcggtcggggtacctgccgttc
ctggcgtgcgcgtcctgccgcgacgccgcccgctgccggcactgcgcgggcccgctgggc
ctgccgcgctccggcgccggctccgagggcgcgctgcccgcctgccgctggtgcggccgc
gcggagccggccttccgctgcgggcactgcgggtcgcggcggctgcgggccggggtcgtc
ggtgccgggcgcaccgccgaggagctgggccgcgcgttccccggcgtcaccgtgcgcacc
tccggcggcggcgccgaggtcctcgacaccgtcccggccgggcccgcgctggtcgtcgcc
accccgggtgcggagcccgtcgtcgagggcggcggcggagcggggtacggcgcagcgttg
ctgctcgacggctgggcgatgctcgcccggcccgatctgcgcgtcgccgaggagacgctg
cgccgctggttcgccgcggccgccggggtcgtcccgcacaccgacggcggacgggtggtg
gtcgtcgccgaggcgtccctgccgacggtgcaggcactggtgcgctgggacccggccggg
cacgccgaggccgagctcgccgaacgcgccgaggtgggcttcccgcctgccgtccggatg
gcctcggtggaggggccgcccgccaccgtcgccgagatctgcgacgcggtgctcggcacc
gggcgcgtcgacccgtccccgcccgagggggtggaggtgctcggaccggtcgagatcgac
ccgccggaccgccccggggccggccacggcgccgccgacgaggtccgggagcgcgcactg
ctgcgggtcccccggcgggccggccgcgacctggcccgggccctgcacgacgcgcaggcc
ctgcgcaccgcccgcaaggcccccgagaccgtgcgggtccggctcgaccccgacgagatc
gactga
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