Pseudonocardia sp. HH130629-09: XF36_12415
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Entry
XF36_12415 CDS
T04082
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
pseh
Pseudonocardia sp. HH130629-09
Pathway
pseh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pseh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
XF36_12415
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pseh03400
]
XF36_12415
Enzymes [BR:
pseh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
XF36_12415
DNA repair and recombination proteins [BR:
pseh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
XF36_12415
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
ALE83853
UniProt:
A0A0M4QAP9
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All DBs
Position
2708046..2711423
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AA seq
1125 aa
AA seq
DB search
MLEIHRAERADTLVEALAGVLAVGSGDPFAAETVAVPERGVERWLAQRLAHRLGAGPGSG
GVCANVRFPAPAALLGGAVAHVTGTDQATDPWSPGRSVWPLLELIDEAVATSGDDRFTAL
AAHLERGGHGRRYALARTLAGLFGSYATHRPELLRRWRAGEEAVPADLRWQPELWRRLRA
ALGVPGPAERLDEAVALLRGGADPGPEVGPRLSLFGPTRLAAEHLAVLESLAAHREVHLW
LPHPSPVMWDAVRAGRTPGVPSRATDTSAEAVRHPLLRSLGRDTRELALRLPPAGPTVAD
THHPAPADTGPPTLLRRLQAMLRDDAVPPAPADRPLLDPDDRSVALHSCHGPDRQVEVLR
EVLLGLLAADPDLEPRDIIVMCPDIEVFAPLITASFGLAPDADTPDGAGPSREELHPGHR
LRVRLADRALRQANPLLGTVSSLLELAGSRVSASQVLDLVASAPVRRRFRFDDDALERLS
ELVTAAGVRWGLDAAHRWPYRLEGIGQNTWRAGLDRMLVGVAMAETPGAPAWLGTALPLD
EVDSSDVDLVGRLAEFVDRLATVLGALRGPQPLSAWVDALVEGLSALTDTTPTDAWQAGQ
ARAELADVVASAGPQAATVDLDLPDVRGLLAERLRGRPSRANFRTGTLTVATLVPMRAVP
HKVVCLLGCDDGVFPRAGAPDGDDVLARDPVVGERDPRGEDRQLLLDAICSATRHLVVVS
SGADERTGADRPPSVPVGELCDAIDACARTTSGTPASRALRARHPLQPFDRRNFTPGALL
ADGPFSFDRTARRGAEAAAGPRTVTPLFGADPLPPPEDPPDGVVELDELVAFVEHPVRAF
LRQRVRVLPPEENVEPDDALPVELDGLATWKIGDRLLTDRLAGAAPRAVARAETLRGDLP
PGGIGHRVLIEVGGQVEPLVAVAATVATSEAGSQDLVAQLTGTPEDGRAVAGTVPGLHGD
VVVRVEYSRLKAKHRLRAWVQLLALTAAHPGRTWTAVTVGRGPGGAARSVLGPVDPGLAR
RTLADLVALRREGLRAALPLPTDAAAVYARNRARGVVPANAFAAAESEWSRFEHAEAPHV
FVRGGAGGPLVVRPEPGSGDEPTRFGELAVRLWAPLLDHERQDAP
NT seq
3378 nt
NT seq
+upstream
nt +downstream
nt
gtgctggagatccatcgggccgaacgcgccgacaccctcgtggaggcgctcgccggcgtg
ctggcggtcggctcgggtgacccgttcgcggccgagaccgtcgcggtccccgagcgcggg
gtggagcgctggctcgcccagcggctggcacaccggctcggcgcggggccgggcagcggc
ggggtctgcgcgaacgtccggttcccggccccggccgcgctgctcggcggggccgtcgcg
cacgtcaccggcaccgaccaggcgaccgacccgtggtcgcccggccggtcggtgtggccg
ctgctggagctgatcgacgaggccgtcgccacctccggggacgaccggttcaccgccctg
gccgcgcacctggagcgtggtgggcacggccgccgctacgcgctcgcccgcacgctggcc
gggctgttcggttcctacgccacccaccgccccgagctgctgcgccgctggcgcgccggg
gaggaggcggtgcccgccgacctgcggtggcagcccgagctgtggcggcgcctgcgcgcg
gcactcggggtccccggtcccgccgagcggctcgacgaggcggtggccctgctgcgcggg
ggcgccgacccggggcccgaggtggggccgcggctgtcgttgttcggcccgacccggctg
gccgccgagcacctggccgtcctggagtccctcgcggcgcaccgggaggtccacctgtgg
ctgccgcacccgtcgccggtgatgtgggacgcggtgcgcgccgggcgtacgccgggggtg
ccgtcgcgcgccaccgacaccagcgccgaggcggtccggcacccgctgctgcgctcgctc
ggccgcgacacccgggagctggcgctgcggctgcccccggccgggcccacggtggccgac
acccaccacccggcccccgccgacaccggcccgccgacgctgctgcgccgcctgcaggcc
atgctgcgcgacgacgccgtgccgcccgcccccgccgaccgtccgctgctcgacccggac
gaccgcagcgtcgcgctgcactcctgccacggcccggaccggcaggtggaggtgctgcgc
gaggtgctgctcgggctgctcgccgcggacccggacctggagccgcgcgacatcatcgtc
atgtgcccggacatcgaggtgttcgcgccgctgatcaccgcctccttcggtctcgccccg
gacgcggacaccccggacggcgcgggcccgtcccgcgaggagctgcaccccgggcaccgg
ctgcgggtgcgcctggccgaccgggcgctgcgccaggcgaaccccctgctgggcaccgtg
tcgtcgctgctggagctcgccgggtcccgggtcagtgcctcccaggtgctcgacctggtc
gcctccgccccggtgcggcgccgcttccgcttcgacgacgacgcgctggagcggctgtcc
gagctggtcaccgcggccggggtgcggtgggggctcgacgcagcgcaccgctggccctac
cggctcgaggggatcgggcagaacacctggcgggccggtctggaccggatgctcgtcggc
gtcgcgatggccgagacaccgggcgccccggcctggctgggcaccgcgctgccgctggac
gaggtcgactcctccgacgtggacctcgtcgggcggctcgccgagttcgtcgaccggctc
gcgaccgtgctcggtgcgctgcgcgggccgcagccgctgtcggcgtgggtggacgcgctg
gtcgaggggctgtcggcgctgaccgacaccaccccgaccgacgcctggcaggccgggcag
gcgcgcgcggagctggccgacgtcgtcgcctccgcggggccgcaggccgccaccgtcgat
ctcgacctgcccgacgtgcgcggtctgctcgccgagcggctgcgcggtcggcccagccgg
gcgaacttccggaccggcacgctgaccgtcgcgacgctggtcccgatgcgggccgtcccg
cacaaggtggtgtgcctgctgggctgcgacgacggggtgttcccccgcgccggcgccccc
gacggggacgacgtgctggcccgggatcccgtcgtcggcgagcgcgacccgcgcggggag
gaccgccagctgctgctcgacgcgatctgctcggccacccgccacctggtcgtggtctcc
tccggcgccgacgagcgcaccggggccgaccgaccgccgtcggtaccggtcggggagctg
tgcgacgcgatcgacgcgtgcgcgcggaccacctccggcacccccgcctcacgggcgctg
cgggcccggcacccgctgcagcccttcgaccggcgcaacttcacccccggcgcgctgctg
gccgacgggccgttcagcttcgaccggaccgcgcggcgcggcgccgaggccgctgccggg
ccgcgcaccgtgaccccgctgttcggtgcggacccgctccccccgccggaggacccgccg
gacggggtggtcgagctcgacgagctggtcgcgttcgtcgagcacccggtgcgggcgttc
ctgcgccagcgggtgcgggtgctgccgccggaggagaacgtcgagcccgacgacgcgctg
ccggtcgagctcgacgggctggccacctggaagatcggtgaccggctgctgaccgaccgg
ctcgccggggccgcgccgcgggccgtggcgcgggccgagacactgcgcggggacctcccg
cccggcgggatcggccaccgggtgctcatcgaggtcggcggtcaggtcgagccgctggtc
gccgtcgccgcgacggtcgcgaccagcgaggcgggctcgcaggacctcgtcgcgcagctc
accggcacacccgaggacggccgcgccgtcgccgggacggtgccgggcctgcacggcgac
gtcgtggtgcgtgtcgagtactcacggctcaaggccaagcaccggctgcgggcctgggtg
cagctgctcgcgctcaccgccgcacaccccggccggacctggacggcggtgaccgtcggc
cgcggccccggcggcgcggcccgatcggtgctcggcccggtcgaccccggcctggcccgt
cgcaccctggccgacctggtcgcgctgcgccgcgagggactgcgggcggcgctgccgctg
ccgaccgacgccgccgccgtctacgcccgcaaccgcgcccgcggagtggtccccgccaac
gccttcgccgcggcggagagcgagtggtcgcgcttcgagcacgccgaagccccgcacgtc
ttcgtccggggcggcgcgggcggcccgctggtcgtccgtcccgagcccggctccggcgac
gagcccacccggttcggggagctcgccgtccggttgtgggcaccgctgctcgaccacgag
aggcaggacgcgccgtga
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