Pseudonocardia sp. HH130629-09: XF36_15275
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Entry
XF36_15275 CDS
T04082
Name
(GenBank) 3'-5' exonuclease
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
pseh
Pseudonocardia sp. HH130629-09
Brite
KEGG Orthology (KO) [BR:
pseh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pseh03016
]
XF36_15275
Enzymes [BR:
pseh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
XF36_15275
Transfer RNA biogenesis [BR:
pseh03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
XF36_15275
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GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Motif
Other DBs
NCBI-ProteinID:
ALE84334
UniProt:
A0A0M4Q7Z5
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All DBs
Position
3337882..3339063
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AA seq
393 aa
AA seq
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MLRPADGLPPVTETPDDLARVAAAIAGGSGPVAVDAERASGFRYSQRAYLVQLRRAGAGS
ALVDPIPLRGELGPLAEALDGPEWVLHAASQDLPCLAELELRPASLFDTEFAGRLAGLPR
VGLGPMVENLLGLGLEKGHGAADWSRRPLPEDWLVYAALDVEVLIDLRDVLTRMLDEQGK
LEWARQEFEAVRTAPPPAPRAEPWRRTSGIHKVRRPRPLAAVRELWLARDALAAERDIAP
GRVLPDAAIVDAAVRNPDSPQALAELPVFRGRSQRRLARYWFDALRRAAELPESELPRGA
ATTDGPPPVSRWADRDPDAAARLAAARAALSTVSEQHDVPVENLLQPDLLRRVCWTPPTD
GDLPAALRAGGARPWQVELLTPVLEPALATRAG
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
ctgctccgtcccgccgacggcctccccccggtcaccgagacccccgacgacctcgcccgc
gtggcggcggcgatcgccgggggcagcggtccggtcgccgtcgacgcggagcgtgcctcc
ggcttccggtactcccagcgcgcctacctggtgcagctgcggcgtgccggtgccgggtcc
gcgctggtggacccgatcccgctgcgcggcgagctggggccgctcgccgaggccctcgac
gggccggagtgggtgctccacgcggcctcgcaggacctcccgtgcctggccgagctggag
ctgcgcccggcgtcgctgttcgacaccgagttcgcgggtcggctcgccgggctcccccgg
gtcgggctcggcccgatggtggagaacctgctgggcctcggcctggagaaggggcacggc
gccgccgactggtcgcgtcgcccgctgcccgaggactggctggtctacgccgcgctggac
gtcgaggtcctcatcgacctgagggacgtcctgacccggatgctcgacgagcagggcaag
ctggagtgggcccgccaggagttcgaggcggtccgcaccgcaccgccgcccgcgccgcgc
gcggagccctggcggcgcacctccggcatccacaaggtccgccgcccccggccgctcgcc
gcggtccgggagctgtggctggcccgcgacgcgcttgcggccgagcgcgacatcgccccc
ggccgggtcctgcccgacgccgcgatcgtcgacgccgcggtgcgcaaccccgactccccg
caggcactggccgagctgccggtgttccgcggacgctcccagcgcaggctggcccggtac
tggttcgacgcgctccgccgggccgccgagctgcccgagtccgagctgccgcgtggcgcc
gcgaccaccgacggccccccgccggtgtcgcgctgggccgaccgggaccccgacgccgcc
gcccggctcgccgccgcccgcgcggcactgagcacggtctccgagcagcacgacgtgccg
gtggagaacctgctgcagcccgacctgctgcgccgggtctgctggaccccgcccaccgac
ggcgacctcccggccgccctgcgcgccggcggcgcccgcccgtggcaggtcgagctcctg
accccggtgctcgaaccggccctggccacccgcgccggctga
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