KEGG   Pseudonocardia sp. HH130629-09: XF36_15275
Entry
XF36_15275        CDS       T04082                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K03684  ribonuclease D [EC:3.1.13.5]
Organism
pseh  Pseudonocardia sp. HH130629-09
Brite
KEGG Orthology (KO) [BR:pseh00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:pseh03016]
    XF36_15275
Enzymes [BR:pseh01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.5  ribonuclease D
     XF36_15275
Transfer RNA biogenesis [BR:pseh03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    XF36_15275
SSDB
Motif
Pfam: DNA_pol_A_exo1 DNA_pol_A_exoN HRDC
Other DBs
NCBI-ProteinID: ALE84334
UniProt: A0A0M4Q7Z5
LinkDB
Position
3337882..3339063
AA seq 393 aa
MLRPADGLPPVTETPDDLARVAAAIAGGSGPVAVDAERASGFRYSQRAYLVQLRRAGAGS
ALVDPIPLRGELGPLAEALDGPEWVLHAASQDLPCLAELELRPASLFDTEFAGRLAGLPR
VGLGPMVENLLGLGLEKGHGAADWSRRPLPEDWLVYAALDVEVLIDLRDVLTRMLDEQGK
LEWARQEFEAVRTAPPPAPRAEPWRRTSGIHKVRRPRPLAAVRELWLARDALAAERDIAP
GRVLPDAAIVDAAVRNPDSPQALAELPVFRGRSQRRLARYWFDALRRAAELPESELPRGA
ATTDGPPPVSRWADRDPDAAARLAAARAALSTVSEQHDVPVENLLQPDLLRRVCWTPPTD
GDLPAALRAGGARPWQVELLTPVLEPALATRAG
NT seq 1182 nt   +upstreamnt  +downstreamnt
ctgctccgtcccgccgacggcctccccccggtcaccgagacccccgacgacctcgcccgc
gtggcggcggcgatcgccgggggcagcggtccggtcgccgtcgacgcggagcgtgcctcc
ggcttccggtactcccagcgcgcctacctggtgcagctgcggcgtgccggtgccgggtcc
gcgctggtggacccgatcccgctgcgcggcgagctggggccgctcgccgaggccctcgac
gggccggagtgggtgctccacgcggcctcgcaggacctcccgtgcctggccgagctggag
ctgcgcccggcgtcgctgttcgacaccgagttcgcgggtcggctcgccgggctcccccgg
gtcgggctcggcccgatggtggagaacctgctgggcctcggcctggagaaggggcacggc
gccgccgactggtcgcgtcgcccgctgcccgaggactggctggtctacgccgcgctggac
gtcgaggtcctcatcgacctgagggacgtcctgacccggatgctcgacgagcagggcaag
ctggagtgggcccgccaggagttcgaggcggtccgcaccgcaccgccgcccgcgccgcgc
gcggagccctggcggcgcacctccggcatccacaaggtccgccgcccccggccgctcgcc
gcggtccgggagctgtggctggcccgcgacgcgcttgcggccgagcgcgacatcgccccc
ggccgggtcctgcccgacgccgcgatcgtcgacgccgcggtgcgcaaccccgactccccg
caggcactggccgagctgccggtgttccgcggacgctcccagcgcaggctggcccggtac
tggttcgacgcgctccgccgggccgccgagctgcccgagtccgagctgccgcgtggcgcc
gcgaccaccgacggccccccgccggtgtcgcgctgggccgaccgggaccccgacgccgcc
gcccggctcgccgccgcccgcgcggcactgagcacggtctccgagcagcacgacgtgccg
gtggagaacctgctgcagcccgacctgctgcgccgggtctgctggaccccgcccaccgac
ggcgacctcccggccgccctgcgcgccggcggcgcccgcccgtggcaggtcgagctcctg
accccggtgctcgaaccggccctggccacccgcgccggctga

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