Pseudonocardia sp. HH130629-09: XF36_17385 Help Entry XF36_17385        CDS       T04082                                  Name (GenBank) DEAD/DEAH box helicase   KO K03724   ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4] Organism pseh  Pseudonocardia sp. HH130629-09 Brite KEGG Orthology (KO) [BR:pseh00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:pseh03400]     XF36_17385 Enzymes [BR:pseh01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.4  DNA 3'-5' helicase      XF36_17385     5.6.2.6  RNA 3'-5' helicase      XF36_17385 DNA repair and recombination proteins [BR:pseh03400]  Prokaryotic type   Other factors with a suspected DNA repair function    DNA helicases     XF36_17385 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DEAD_assoc WHD_Lhr WHD_2nd_Lhr WHD_4th_Lhr DEAD WHD_3rd_Lhr Helicase_C ResIII DUF6406 EutK_C MarR AAA_25 Motif Other DBs NCBI-ProteinID:  ALE84690 LinkDB All DBs Position 3805802..3810838 Genome browser AA seq 1678 aa AA seqDB search MMVGVTALEGFSPATRQWFEGAFAAPTAAQEGAWSAAQAGRNALVVAPTGSGKTLAAFLW ALDRLAVTPPPAERKHRCRVLYVSPLKALAVDVQRNLRSPLTGIRQAAQRLDEPVPDITV GMRTGDTPADERRQFQRTPPDVLVTTPESLFLLLTSAARESLRGVTTVILDEVHAVAGTK RGAHLAVSLERLEEITEATPQRIGLSATVRPVDEVSTFLSGTRPVEVVQPAIPKTIRVEV QVPVPDLAALDERPAPGSTDEEVVGSAAGTARRPSIWPAVEERLLGLVREHRSTIVFSNS RRLAERLTSRLNELAAEQEAAALEEAAHLDTAPGAFPAEAVGQSGVGGGVAPTVAKAHHG SMSRDQRTLVEEELKSGVLPCVVATSSLELGIDMGAVDLVVQVEAPPSVASGLQRVGRAG HQVGAVSEGVVFPKYRGDLVSCAVVAERMTTGSIESTRYPRNPLDVLAQQIVAMVAMESW RLSDLAATVRRAAPFAALPDSALHSVLDMLAGRYPSEEFGELRARITWDRVTDELRGRPG AQRLAVTSGGTIPDRGLFTVMTPGGADGAGSRVGELDEEMVYESRVGDTFLLGTSSWRVE DITHDRVIVTPAPGVPARMPFWKGESIGRPLELGRAVGAFVREMSGLADTEARERATAAG LDAWACDNLLSYLREQREATRHVPSDRTILVERFRDELGDWRLVVHSPFGAQVNGPWALA IAARMRERRGVEVSASGADDGIVLRLPDAVDDNGTEVVPSAEDVLLEPGEIEQIVVAELG NSALYASRFRECAARALLLPRRDPRRRSPLWQQRQRSAQLLGVAGKFEQFPITLEAMREC VQDVYDLPGLRELMGDVAARRVKVVEVESAQPSPFARSLLFGYVGMFLYEADAPLAERRA AALSLDSTLLAELLGSEAIRELLDPEMLAEIEGQLQRTAPERHARDMEGAADLLRFVGDL SEADARARGVDPAWLAQLERDRRALRVRIAGEERFIAIEDAGRIRDALGTALPVGVPEAF TEPVPDPLGDLVLRWARTHGPFTAAELARRFGLGVAVVAGVLERLTGTGRLMKGELRPQA SVPAGSGGELEYCDAEVLRRLRRASLAKLRHEVEPVEQRALGRFLPQWQGVQVRSGSERR GRVRRAPGAEDVLGVVEQLAGAPLPASAVESLVLPARLPGYTPALLDELTAAGEVTWVGC GALSGQDGWLALAPADVADLLLPAPDLDTAGTPLHTAVLAALGLTDPAALTDPGAAPDSG GGALFFRELATRAGVLLTEQGEPAPSDDDVVAAVWDLVWAGALTNDTLGPLRARLSGGGS RRGASGRQGGAHRTARRPARGRYAQLRAGRPSMPSRTGPPSVGGRWSVAVPREPDPTRRA HAAAEAFLERHGVLTRGALGTERVTGGFAAVYKVLRAMEESGRCRRGYIVEGLGAAQFAV PGAIDRVRALAGIESGPSPAPPTGPRRLGAGPGAVVTDPTDRTGSAGRAGSVDRAGDGEP LPDALSGDAAGLPMSDDPYAGVPDDLRGGLGGAGRHAEFDGGAGRRPQAPREAWRELSRV VLAATDPAQPYGAALPWPDTTGETRHRPGRKAGALVTLVDGAPALYVERGGKSLLSFTED RDELRAGAESLAGAVHEGWLGSLAVERADGQDSLASALSEVLTEAGFRVTPKGLRLRA NT seq 5037 nt NT seq  +upstreamnt  +downstreamnt atgatggtcggcgtgaccgcactcgagggcttctcccccgccacccgccagtggttcgag ggggccttcgccgcgcccaccgcggcccaggagggcgcctggtccgcggcacaggccggg cgcaacgccctcgtcgtcgcgccgaccgggtccggcaagaccctggccgcgttcctctgg gcgctcgaccggctcgcggtgacgccaccgcccgccgaacgcaagcaccgctgccgggtc ctctacgtctccccgctcaaggccctcgccgtcgacgtgcagcgcaacctccgctcgccg ctgaccggcatccgccaggccgcgcagcggctcgacgagccggttccggacatcaccgtc gggatgcgcaccggcgacaccccggccgacgagcggcgccagttccagcgcaccccgccg gacgtgctggtgaccactccggagtcgctgttcctcctgctcacctcggccgcgcgggag tcgctgcgcggggtgacgaccgtgatcctcgacgaggtgcacgccgtcgccggcacgaag cggggggcgcacctggcggtgtcgctggaacggctcgaggagatcaccgaggccacccca cagaggatcgggctctcggcgaccgtgcgcccggtcgacgaggtctcgacgttcctgtcc ggtacgcgcccggtcgaggtcgtgcagcccgcgatccccaagacgatccgggtcgaggtc caggtcccggtgcccgacctggccgcgctcgacgagcggcccgcgccgggcagcaccgac gaggaggtcgtcgggtccgccgcgggcaccgcacgcaggccctcgatctggcccgccgtc gaggagcggctgctcggcctggtgcgcgagcaccggtcgacgatcgtgttctccaactcc cgccggctcgccgagcggctgacctcccggctcaacgagctcgccgccgagcaggaggcc gccgcactggaggaagccgcccacctcgacaccgcgccgggcgcgttcccggccgaggcg gtcgggcagtccggggtgggcggcggggtcgcaccgacggtcgccaaggcccaccacggc tcgatgtcgcgtgaccagcggaccctggtcgaggaggagctgaagtccggcgtgctgccg tgcgtcgtcgcgacgtccagcctggagctgggcatcgacatgggcgcggtcgacctggtc gtgcaggtcgaggcaccgccgtcggtcgcgtccgggctgcagcgggtcgggcgcgccggg caccaggtgggcgcggtgtccgagggtgtcgtgttcccgaagtaccgcggggacctcgtg tcctgcgccgtcgtcgccgaacggatgacgaccgggtcgatcgagtccacccgctatccc cggaacccgctcgacgtcctggcccagcagatcgtcgcgatggtcgcgatggagtcgtgg cggctgtccgacctggccgcgacggtccgccgggcggccccgttcgcggcgctgccggac tccgcgctgcactcggtgctcgacatgctggccgggcgctacccgtccgaggagttcggc gagctgcgcgcccgcatcacctgggaccgggtcaccgacgagctgcgcgggcgcccgggt gcgcaacgcctggccgtcacctccggcggcaccatccccgaccgcggcctgttcaccgtg atgaccccgggcggcgcggacggcgccgggtcgcgggtcggtgagctcgacgaggagatg gtctacgagtcccgagtcggggacacgttcctgctggggacctcgtcgtggcgggtcgag gacatcacccacgaccgcgtgatcgtcactccggcgccgggggtgcccgcccggatgccg ttctggaagggcgagtcgatcggtcggccgctggagctgggccgggcggtcggcgcgttc gtgcgcgagatgtccgggctggccgacaccgaggcccgcgagcgcgccaccgcggccggg ctcgacgcgtgggcctgcgacaacctgctgtcctacctgcgcgagcagcgtgaggcgacc cggcacgtgccgagcgaccgcacgatcctggtggagcggttccgcgacgagctgggcgac tggcgcctcgtcgtgcactcgccgttcggtgctcaggtcaacgggccgtgggcactggcg atcgcggcccggatgcgggagcgacgcggggtcgaggtgagcgcgtcgggcgcggacgac gggatcgtgctgcgcctgccggacgcggtcgacgacaacggcaccgaggtcgtcccgagt gcggaggacgtgctgctggaaccgggcgagatcgagcagatcgtcgtcgcggagctgggg aactcggcgctctacgcctcccggttccgggagtgcgccgcgcgggcgctgctgctgccc cgtcgcgacccgcgccgccgcagcccgctgtggcagcagcgccagcgctcggcacagctg ctgggcgtggcgggcaagttcgagcagttcccgatcaccctggaggcgatgcgggagtgt gtgcaggacgtctacgacctgccggggctccgcgagctgatgggcgacgtcgccgcgcgc cgggtcaaggtcgtcgaggtcgagtccgcgcagccgtcgccgttcgcgcgcagcctgctg ttcggctacgtcgggatgttcctctacgaggccgacgcaccgctggccgagcgccgcgcg gccgccctgtcgctggactcgacgctgctggcggagctgctcggctccgaggcgatccgg gagctgctcgacccggagatgctggccgagatcgaggggcagctgcagcgcaccgccccg gagcggcacgcccgtgacatggagggtgccgcggacctgctccgcttcgtcggtgacctg tccgaggccgacgcgcgggcccgaggcgtcgacccggcgtggctggcgcagctggagcgc gaccgccgggcgctgcgggtgcggatcgccggtgaggaacgcttcatcgcgatcgaggac gccgggcgcatccgggacgcgctgggcacggcgctgccggtcggggtgccggaggccttc accgagccggtgcccgacccgctcggggacctcgtgctgcgctgggcacgcacacacgga ccgttcaccgccgccgagctcgcccgtcgcttcgggctgggagtggccgtggtcgccggg gtgctggaacggctcaccggcaccgggcggctgatgaagggcgagctgcgcccgcaggcc tcggtgcccgccggatccggcggtgagctggagtactgcgacgccgaggtgctgcgccgg ctgcggcgcgcgtcgctggcgaagctgcggcacgaggtcgagcccgtcgagcagcgggcg ctggggcggttcctgccgcagtggcagggcgtgcaggtgcggtcgggttccgagcggcgc ggccgggtgcgccgtgcaccgggggcggaggacgtgctcggtgtggtcgagcagctcgcc ggggcgccgctgccggcgagcgcggtcgagtcgctggtgctgcccgcccggctgccgggc tacacccccgcgctgctcgacgagctgaccgccgccggtgaggtgacctgggtcgggtgc ggcgcgctgtccgggcaggacggctggctcgcgctggccccggccgacgtggcggacctg ctgctgcccgccccggacctcgacaccgcgggcaccccgctgcacaccgcggtgctggcc gcgctcgggctgaccgacccggccgcgctgaccgacccgggggcggcgcccgattccggg ggcggtgcgctgttcttccgcgagctcgcgacccgggccggggtcctgctgaccgagcag ggcgagccggctccctccgacgacgacgtcgtcgccgccgtctgggacctggtctgggcg ggtgcgctcaccaacgacacgctcggcccgctgcgggcccggctgtccgggggcggctcg cgacggggcgcctccgggcggcagggcggggcgcatcgcacggcgcggcgaccggcccgc ggacgctacgcacagctgcgtgcggggcggccgtcgatgcccagccggaccgggccgccg tcggtcggcgggcgctggtcggtggcggtgccgcgcgagcccgacccgacccgccgtgcg cacgccgccgcggaggcgttcctggagcgtcacggcgtgctgacccggggcgcgctgggc accgagcgggtcacgggtgggttcgccgcggtctacaaggtgctccgggcgatggaggag tccggccggtgccgacgcggctacatcgtcgaggggctgggcgcggcgcagttcgcggtg ccgggtgcgatcgaccgggtccgggcactcgccgggatcgagagcggcccgtcccccgcc ccgccgaccggtccgcgccgcctcggcgccgggccgggcgcggtcgtcaccgaccccacc gaccgcaccgggtccgccggcagggccgggtccgtggaccgggccggggacggcgagccc ctgcccgacgccctctccggcgacgcggccggactcccgatgtccgacgacccgtacgcc ggggtgcccgacgacctgcgcggcgggctcggcggcgcgggtcgccacgccgagttcgac gggggcgccggtcgccgcccgcaggcgccgcgggaggcgtggcgcgagctgtcccgggtg gtgctcgccgccaccgaccccgcgcagccctacggcgccgccctgccgtggccggacacg accggcgagacccggcaccgccccggtcgcaaggcaggcgccctggtcaccctcgtcgac ggggcgccagcgctctacgtcgaacgcggcgggaagtccctgctgtcgttcaccgaggac cgtgacgagctgcgcgccggggccgagtcgctcgccggggcggtgcacgagggctggctg gggtcgctcgccgtcgagcgcgccgacggacaggactcgctggcctcggcgctgtcggag gtgctcaccgaggccgggttccgggtgacgccgaaggggctgcggctgcgggcctga

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