Pseudonocardia sp. HH130629-09: XF36_17490 Help Entry XF36_17490        CDS       T04082                                  Name (GenBank) ribonuclease J   KO K12574   ribonuclease J [EC:3.1.-.-] Organism pseh  Pseudonocardia sp. HH130629-09 Pathway pseh03018   RNA degradation Brite KEGG Orthology (KO) [BR:pseh00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     XF36_17490  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:pseh03019]     XF36_17490 Messenger RNA biogenesis [BR:pseh03019]  Prokaryotic type   Bacterial mRNA degradation factors    RNA degradosome components     Ribonucreases      XF36_17490 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  RNase_J_b_CASP RNase_J_C RMMBL Lactamase_B_2 Lactamase_B Anti-Pycsar_Apyc1 Motif Other DBs NCBI-ProteinID:  ALE84709 LinkDB All DBs Position complement(3829427..3831115) Genome browser AA seq 562 aa AA seqDB search MERPELPDGPPPALAQGGLRVYALGGIGEVGRNMTVFEYEGRLLIVDCGVLFPSDSEPGI DLILPDFRTIEDRLDDIDALVLTHGHEDHIGAVPWLLRMRPDIPVVGSRFTLALVAAKCK EHRLTPHLQEIREGDRVSHGGWDCEYFAVNHSIPDAVAVAVRTPAGLLLHTGDIKLDQLP LDGRLTDLGGFSRLGEEGVDLFLVDSTNAEVPGFVTPEADIGPVISDLVRRAPSRIILAC FASHVHRVQQVLDAAQAHGRKVCLTGRSMVRNMGLADDHSLLNIPPGLLVDIDEAMRLPD EKLVLVSTGSQGEPLAALSRMARGDHRSITIRPDDTIILASSLIPGNETAVFGVINGLTR LGATVVHQGNAKVHVSGHAPAGELLFLYNAVRPSNVMPVHGEWRHLRANAALARRTGVPE ESVVIAENGVVVDLVDGRAAITGRVEVGQVYVDGLSVGDVGETTLGDRIALGEGGFIAIN VAIDHKTGRALSRPTLSGRGFSDDPKALDAAQALVEDELSRLENEGVTDPHRIAQGVRRV VGRWVSDTYRRRPMIVPTVIAV NT seq 1689 nt NT seq  +upstreamnt  +downstreamnt atcgagcgtccggagctcccggacggcccgccacccgccctcgcgcagggtggcctgcgc gtctacgcgctcggcggcatcggtgaggtcggtcgcaacatgaccgtcttcgagtacgag ggccggctgctcatcgtcgactgcggcgtgctgttcccctccgactccgagccgggcatc gacctgatcctgcccgacttccgcaccatcgaggaccgcctcgacgacatcgacgcgctc gtgctcacccacggccacgaggaccacatcggtgccgtgccgtggctgctgcggatgcgc ccggacatccccgtcgtcgggtcccggttcacgctcgccctggtcgcggcgaagtgcaag gagcaccgcctgaccccgcacctgcaggagatccgcgagggcgaccgcgtctcccacggc gggtgggactgcgagtacttcgcggtcaaccactcgatccccgacgccgtcgccgtcgcc gtccgcacgcccgccgggctgctgctgcacaccggtgacatcaagctcgaccagctcccg ctcgacgggcggctcaccgacctgggcgggttctcccggctgggcgaggagggcgtcgac ctgttcctggtcgactccaccaacgccgaggtgccgggcttcgtcacccccgaggccgac atcgggccggtcatctccgacctggtccgccgggcgccgtcgcgcatcatcctggcctgc ttcgccagccacgtgcaccgtgtccagcaggtgctcgacgccgcgcaggcccacggccgc aaggtgtgcctgaccgggcggtccatggtccgcaacatgggcctggccgacgaccactcg ctgctgaacatcccgccggggctgctcgtcgacatcgacgaggcgatgcgcctgcccgac gagaagctggtgctcgtctccaccggatcgcagggtgagccgctcgccgcgctgtcccgg atggcgcgcggggaccaccgcagcatcacgatccgcccggacgacacgatcatcctggcc agctcgctgatccccggcaacgagaccgccgtcttcggcgtgatcaacgggctgacccgg ctcggcgccaccgtcgtgcaccagggcaacgccaaggtgcacgtctccgggcacgccccg gccggcgagctgttgttcctctacaacgcggtgcgcccgtcgaacgtcatgccggtgcac ggggagtggcgccacctgcgggccaacgccgcgctcgcgcgtcgcacgggggtgccggag gagtcggtggtcatcgcggagaacggcgtggtcgtcgacctcgtcgacggccgcgcggcg atcaccggccgggtcgaggtcgggcaggtctacgtcgacgggctgtcggtcggcgatgtg ggagagaccacgctcggtgaccgcatcgcgctcggcgagggcggtttcatcgcgatcaac gtggcgatcgaccacaagaccggccgcgcgctgtcgcgcccgacgctgtccgggcgcggg ttctccgacgacccgaaggcgctcgacgccgcccaggcgctggtcgaggacgagctgtcc cggctggagaacgagggcgtcaccgacccgcaccggatcgcccagggcgtgcggcgcgtg gtcggccgctgggtgtccgacacctaccgtcgccgccccatgatcgtccccacggtcatc gcggtgtga

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