Pseudonocardia sp. HH130629-09: XF36_20570
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Entry
XF36_20570 CDS
T04082
Name
(GenBank) exodeoxyribonuclease VII small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
pseh
Pseudonocardia sp. HH130629-09
Pathway
pseh03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pseh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
XF36_20570
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pseh03400
]
XF36_20570
Enzymes [BR:
pseh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
XF36_20570
DNA repair and recombination proteins [BR:
pseh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
XF36_20570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
ETF_alpha
Motif
Other DBs
NCBI-ProteinID:
ALE85244
UniProt:
A0A0M5LU73
LinkDB
All DBs
Position
4479468..4479698
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AA seq
76 aa
AA seq
DB search
MSDRPAVETLGYEKARDELMEVVRALEVGGLGLDESVALWERGEALAKRCDAQLAGARTR
IEEKLADADSDDPDGT
NT seq
231 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaccgaccggcagtggagaccctgggctacgagaaggcccgcgacgagctcatg
gaggtcgtgcgcgcgctggaggtcggcggcctcggcctggacgagtccgtcgcgctgtgg
gagcgcggcgaggccctggccaagcgctgcgacgcccagctcgccggcgcccgcacccgc
atcgaggagaagctggccgacgccgactccgacgaccccgacggcacctga
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