Pseudonocardia sp. HH130629-09: XF36_28145
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Entry
XF36_28145 CDS
T04082
Name
(GenBank) ABC transporter
KO
K14699
ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
Organism
pseh
Pseudonocardia sp. HH130629-09
Pathway
pseh02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pseh00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
XF36_28145
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pseh02000
]
XF36_28145
Transporters [BR:
pseh02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
XF36_28145
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
AAA_21
HUTI_composite_bact
ABC_ATPase
AAA_33
AAA_22
AAA
SbcC_Walker_B
AAA_29
AAA_16
Zeta_toxin
AAA_5
TsaE
AAA_28
NACHT
AAA_18
AAA_19
AAA_30
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
ALE86533
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All DBs
Position
6056556..6058301
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AA seq
581 aa
AA seq
DB search
MIGDLLLILGPEHRRRLYAYLGWVSAFGVLQGVATVLLVPFLEALFAGDTGAALTWVGVL
AVAVVAACVLYYVQAMAGFGVALVVLTTLHGRLGDHVSALPLGWFSSERVGRLSRIATGG
TTMIAGLFAHLLTPLVVAVVTPATIVLAMLLFDVRLALAALVCVPVLWLAFRASASWVGR
GDALDDAAAVAAGNRVVEFARTQRVLRAFGRGAAGHRPLEDAIDAQYRAGRRSVWLATAG
IVIGGFAVQLAFSAILLTGVYLVLGGTLDALRMVALLALAARFTGPLAEVGDYAGVVRIA
RNDLGRLVAVLREEPLPEPHWSAERHDPGAVEFDGVGFGYEPSTPVLRDVTLRIAPRETV
ALVGASGSGKTTVTRLVARFWDVDTGTVRVGGADVRDQTTEDLMAQLALVFQDVYLFDGT
LEANVRLGRPAATDAEVTEAARLAGVTEIVERLPDGWDTRVGEGGTSLSGGERQRVSVAR
ALLKNADIVLLDEATAALDPENERFFTESMRVLAQRSTVLVIAHRLPTVVGADRIVVLDD
GRVAEVGTHAELLARQGRYAAFWNSRRRVRGWRLVGTGEPS
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
gtgatcggcgacctgttgctgatcctggggccggaacaccggcgcaggctctacgcctac
ctggggtgggtgagcgcgttcggtgtcctccagggcgtcgcgacggtcctgctcgtgccg
ttcctggaggcgctgttcgccggggacaccggtgccgccctgacctgggtgggggtgctg
gcggtggccgtcgtggccgcctgcgtcctctactacgtgcaggcgatggcgggcttcggc
gtcgccctggtcgtgctgacgacgctgcacggacggctcggggaccacgtgtccgcgctg
ccgctgggctggttctcctcggagcgggtcggccggctgtcgcggatcgccaccggcggc
accacgatgatcgcggggctgttcgcgcacctgctgacaccgctggtcgtcgcggtggtg
acgccggcgacgatcgtgctggcgatgctgctgttcgacgtgcggctcgcgctggccgcg
ctggtgtgcgtgccggtgctctggctggcgttccgggcgtcggcctcctgggtggggcgc
ggcgacgccctcgacgacgccgccgcggtggccgcgggcaaccgggtcgtggagttcgcc
cggacccagcgggtgctgcgggcgttcggccgcggcgccgccgggcaccggccgttggag
gacgcgatcgacgcccagtaccgcgcggggcggcgctcggtgtggctggcgacggcgggc
atcgtgatcggggggttcgcggtgcagctggcattcagcgcgatcctgctgaccggcgtg
tacctggtgctcggcggcacgctcgacgccctccggatggtggcgctgctcgcgctggcc
gcccggttcaccggcccgctggccgaggtcggcgactacgccggcgtcgtccggatcgcc
cgcaacgacctgggccggctggtggcggtactgcgcgaggagccgcttcccgagccgcac
tggtcggcggagcggcacgatcccggggccgtcgagttcgacggggtcgggttcggctac
gagccgtcgacgccggtgctgcgcgacgtcacgctgcggatcgcgccgcgcgagacggtc
gcgctggtcggcgcgtccgggtcgggcaagaccacggtgacccggctggtcgcgcgcttc
tgggacgtcgacaccggcaccgtgcgggtgggcggtgccgacgtccgggaccagaccacc
gaggacctgatggcccagctggcgctggtcttccaggacgtctacctgttcgacgggacg
ctggaggccaacgtacgtctcggccgcccggccgccaccgacgccgaggtcaccgaggcc
gcccggcttgccggggtgaccgagatcgtcgagcggctccccgacggctgggacacccgt
gtcggggagggcggcacgtcgctgtcgggcggggagcgccagcgggtgtcggtcgcccgc
gcgctgctcaagaacgccgacatcgtgctgctcgacgaggccaccgccgcgctcgacccg
gagaacgagcggttcttcacggagtcgatgcgggtcctggcgcagcgcagcaccgtcctg
gtgatcgcgcaccggctgcccacggtggtcggcgccgaccggatcgtcgtgctcgacgac
ggccgggtcgccgaggtcggcacgcacgccgagctgctggcccggcagggccggtacgcc
gccttctggaactcccgccgccgcgtccgcggctggcggctcgtcggaaccggggagccc
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