Pseudactinotalea sp. HY158: GCE65_01425
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Entry
GCE65_01425 CDS
T06271
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
psei
Pseudactinotalea sp. HY158
Pathway
psei03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psei00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
GCE65_01425 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psei03400
]
GCE65_01425 (recD)
Enzymes [BR:
psei01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
GCE65_01425 (recD)
DNA repair and recombination proteins [BR:
psei03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
GCE65_01425 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
RecD_N
UvrD_C_2
Viral_helicase1
AAA_11
UvrD-helicase
AAA_22
Helicase_RecD
SH3_13
PhoH
AAA_16
AAA_28
nSTAND3
SLFN-g3_helicase
AAA_33
AAA
DEAD
NTPase_1
DO-GTPase1
LapD_MoxY_N
TraI_hel_assoc_N
Motif
Other DBs
NCBI-ProteinID:
QGH68320
UniProt:
A0A5Q2VWF5
LinkDB
All DBs
Position
329472..331364
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AA seq
630 aa
AA seq
DB search
MSSALALEATGVDRLGEWDPARVRGLSGLLAALNETGEITAADVHIARGLTRLTGEERET
HALAVALTVRAVRGGSVCLDLGGVPVGPDDERTQLWPAVPPEDWPRVHEDGWVAELAGSA
LIGGSGEAGVHPLRLDGDRLYLDRYWQEETAVLTHLETRGARSVPVDEAALAASLAEYFP
GEGFADQRAAAEVAARSLTSVITGGPGTGKTTTVARLLGSLLDQDPYARIALAAPTGKAA
ARMAEAIRAAAADPTFPTRHADRIAALPATTIHRLLGTIPDQGTRFRHHRGNRLPVDMVV
LDETSMVSLTMMARILEALRPGARLVLVGDADQLASVEAGAVLGDLVAGLRSRPGAPVAE
LTRNRRFGEGIGALAGAVRDGDSDAALAALTSGNPSRRFIGIDDLEGIVTPAALRLHELA
AAGDRAGALTVLEEHRMLCAHRDGPTGAAHWNRRLEEWLAASLGHRLGRWYPGQPLLVTS
NDYGLRLYNGDIGVVVDTGAGGLAAVIADGSHPQGRLVALARLNDVVTAHAMTVHRSQGS
QFQDVSVLLPAIDSAILTRELLYTALTRARRSVAIVGEQEVLVRAITHHTSRASGLAQRL
ARSAGSVARGHELVDHAARQPPTLRDGDAV
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcgcgcttgcactcgaggcgaccggcgtcgaccggctgggggagtgggacccg
gcacgggtccgaggcctgagcgggctgctcgccgccttgaacgagacgggcgagatcacc
gccgccgacgtccacatcgcccgcggactgacccggctgaccggggaggagcgggagacc
cacgcgctcgcggtggcactgaccgtgcgggccgtgcggggcggatcggtgtgcctcgac
ctcggtggggtgccggtgggacccgacgacgagcgcacgcagctgtggcccgcggtgccg
ccggaagactggccccgtgtgcacgaggacgggtgggtcgcggaattggccggctccgcc
ctgatcggcgggtcgggtgaggccggcgtgcaccccctgcggctcgacggcgaccgcctc
tacctcgaccgctactggcaggaggagaccgcggtgctcacgcacctggagacccgcggg
gcgaggagcgtgccggtcgacgaggcggcgctcgcggcctccctcgccgagtacttcccg
ggcgagggcttcgccgaccagcgcgcggcggcggaggtggcggcccgctccctcacgagc
gtcatcaccggcggtcccggcaccggcaagaccacgaccgtcgcgcggctcctgggcagc
ctcctcgaccaggacccgtacgcccggatcgccctcgcggcgccgaccgggaaggcggcc
gcgcggatggccgaggcgatccgcgccgcggccgccgatcccaccttcccgacccggcac
gccgaccggatcgcggccctgcccgccaccacgatccaccggctgctcgggaccatcccc
gatcagggcacacggttccggcaccatcgcgggaaccggctcccggtcgacatggtcgtc
ctggacgagacctcgatggtctccctcacgatgatggcccgcatcctcgaggcgctgcgg
ccgggggcacggctcgtgctcgtgggcgatgccgaccagctggcctcggtcgaggcgggt
gcggtgctgggcgacctcgtcgcgggcctgcggagccggcccggggcgcccgtggcggaa
ctgacccgcaaccggcgcttcggagaggggatcggcgccctcgcgggggccgtgcgggac
ggggattctgacgcggcgctcgccgccctcacgagcgggaacccgagccggcggttcatc
ggaatcgacgacctggagggcatcgtcacgcccgcggccctgcgactgcacgagctcgcc
gccgcgggggaccgggccggggcgctcacggtgctcgaggagcaccggatgctatgcgcc
caccgggacgggccgaccggcgcggcccattggaaccgacggctcgaggaatggctcgcg
gcctcgctcgggcaccggctcgggcgctggtaccccggccagccgctgctcgtcacctcg
aacgactacggcctgcggctgtacaacggcgacatcggcgtggtggtcgacaccggcgcg
ggcgggctcgcggccgtcatcgccgacggcagccacccgcaggggcggctcgtcgccctc
gcccggctcaacgacgtcgtcaccgcccacgccatgaccgtgcaccgctcccagggttcg
cagttccaggacgtgagcgtgctcctacccgcgatcgactcggcgatcctcacccgggaa
ctgctctacaccgccctcacccgggcgcgccgctcggtcgcgatcgtcggcgagcaggag
gtgctcgtgcgggccatcacccaccacacgagccgggcgtccgggctggcgcagcggctg
gcacggtcggcggggtcagttgcccgcggccacgaactggtcgatcacgctgcgcggcag
ccgcctaccctccgggacggcgatgccgtgtga
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