Pseudactinotalea sp. HY158: GCE65_10080
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Entry
GCE65_10080 CDS
T06271
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
psei
Pseudactinotalea sp. HY158
Pathway
psei03030
DNA replication
psei03430
Mismatch repair
psei03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psei00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GCE65_10080 (dnaE)
03430 Mismatch repair
GCE65_10080 (dnaE)
03440 Homologous recombination
GCE65_10080 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psei03032
]
GCE65_10080 (dnaE)
03400 DNA repair and recombination proteins [BR:
psei03400
]
GCE65_10080 (dnaE)
Enzymes [BR:
psei01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GCE65_10080 (dnaE)
DNA replication proteins [BR:
psei03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GCE65_10080 (dnaE)
DNA repair and recombination proteins [BR:
psei03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GCE65_10080 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
MCM10_OB
HHH_3
Motif
Other DBs
NCBI-ProteinID:
QGH69817
UniProt:
A0A5Q2VW55
LinkDB
All DBs
Position
complement(2277086..2280631)
Genome browser
AA seq
1181 aa
AA seq
DB search
MSSADFVHLHVHTEYSMLDGAARLDDLFAEAQRLGQTSLAMTDHGYLFGAYDFWRTARKH
DIKPIIGVEAYVTPGTSRFDKTRVRWGEESQRGDDVSGSGAYTHMTLLAENTAGMHNLFR
MSSLASLEGQLGKWPRIDRDLLQRYSGGLIGTSGCASGEVQVKLRLGQREAARRAAGEMQ
DILGKDNFFIEIMDHGADIERRTISELLELATELDAPLLATNDLHYTRAEDAHSHEALLC
VQSASTLMEPTYDQGGKRFAFSGQGYYLKSAAEMRSIFPDHPQACDNTLLVAERCDVSFT
EEVGRYMPHYPVPEGEDEISTFVKAVEVGLHRRYAGAVPDDVDKQARYEIEVITSKGYAG
YYLVVADFINWAKDNGIRVGPGRGSGAGSMAAYAMGITDLDPLQHGLIFERFLNPERMSL
PDFDIDFDERRRGEVIKYVSERYGEEQVSYIVTYGTIKAKQALKDSARVLGYEFSMGERL
TKALPAAVMGKDITLSGTHDPEDKRYAEAGDFRELISTDPDAARVFDTAKGLENLKRQWG
VHAAGVIIASEPLIDIIPIMRRPQDGAVITQIDFPAGEDLGLVKMDFLGLRNLTILDDAL
ENIRLNGKEPVVIEDVALDDRDTYALLSRGETLGVFQLDGGGMRTLLRQMRPDNFEDISA
VGALYRPGPMGANSHTNYALRKNGLQPITPLHPGLAGPLDDILGTTYGLIVYQEQVMEIA
QKLAGYTLGQADLLRRAMGKKKKEVLDAEYIPFSGGMRANGYTDAAIQALWDVLVPFSDY
AFNKAHSAAYGVVSYWTAYLKANYPVEYMAALLTSTRVDKDKSALYLNECRHMRITVLPP
DVNDSVGMFTAVGADIRFGMAAVRNVGENVVAGIIAAREEKGAFTSFSDFLEKVPAQVCN
KRTIESLIKAGAFDSLGHTRRSLLMIYEQAIDAIVGVKRKEAEGQFDLFASLDGPDEGAT
FAVEVPDLPEWEKKQKLTFEREMLGLYVSDHPLAGIDHVLEQAADCSIATLNEDESRPDG
SQVSVAGLITAVDRRSSKAGRPFAIVTVEDMTGSIEIMFFGETYLAYTTALAQDTVIIIK
GRVRRRDEEMGLHAVEVTVPDVIAGDHAPVRLTMPTIRCTEPMVERLRGVLTTHPGGSEV
QLWLTAGDKATIMRLDDGLRVERNAALFGELKALLGPNCLN
NT seq
3546 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcggctgatttcgtccacctgcacgtccacaccgagtactccatgttggacggc
gcagctcgcctcgacgacctgttcgccgaggcgcagcggctcgggcagacctcgctggcc
atgaccgaccacggctacctgttcggcgcgtacgacttctggcgcaccgcacgcaagcac
gacatcaagccgatcatcggcgtcgaggcctacgtcacccccggcacgagccgcttcgac
aagacccgggtccgctggggggaggagtcccagcgcggcgacgacgtctccggcagcggc
gcctacacccacatgaccctgctcgcggagaacaccgcgggcatgcacaacctgttccgg
atgagttccctcgcctcgctcgagggccaactgggcaagtggccgcgcatcgaccgcgat
ctgctgcagcgctactccggtgggctcatcggcacgagcggttgtgcgtcgggggaggtg
caggtcaagctgcggctcgggcagcgcgaggccgcccgccgggccgccggtgagatgcag
gacatcctcggcaaggacaacttcttcatcgagatcatggaccacggcgccgacatcgag
cggcgcacgatcagcgagctgctcgaactcgcgacggagctcgacgcgccgctgctcgcc
acgaatgacctgcactacacccgcgccgaggacgcccactcccacgaggcgttgctgtgc
gtgcagtcggcctccaccctcatggagcccacctacgaccaggggggaaagcggttcgcg
ttctccgggcagggctactacctcaagagcgccgcggagatgcgctcgatcttccccgat
cacccccaggcgtgcgacaacaccctgctcgtggccgagcgctgcgacgtctccttcacc
gaggaggtcgggcgctacatgccgcactacccagtgcccgagggggaggacgagatctcc
accttcgtcaaggcggtcgaggtcggcctgcaccgccgctacgccggcgccgtgcccgac
gacgtggacaagcaggcgcggtacgagatcgaggtcatcacgtccaaggggtacgccggc
tactacctcgtggtcgcggacttcatcaactgggccaaggacaacgggatccgggtgggg
ccggggcgtggttcgggggccgggtcgatggcggcgtacgccatgggcatcaccgacctc
gacccgctccagcacgggctcatcttcgagcgcttcctcaatcccgagcggatgagcctt
cccgacttcgacatcgacttcgacgagcgtcgccgcggcgaggtgatcaagtacgtctcg
gagcgctacggcgaggagcaggtctcctacatcgtcacctacggcacgatcaaggccaag
caggcgctcaaggactccgcgcgcgtgctcggctacgagttctcgatgggggagcggctg
accaaggcgctgccggccgcggtcatgggcaaggacatcaccctgagcgggacccacgac
ccggaggacaagcgctacgccgaggccggcgacttccgcgagctcatctccaccgacccc
gacgccgcgcgcgtcttcgacacggccaaggggctcgagaacctcaagcggcagtggggg
gtgcacgcggccggggtgatcatcgcctccgaaccgctcatcgacatcatcccgatcatg
cgccgcccccaggacggggccgtgatcacccagatcgacttccccgccggggaggatctc
gggctggtcaagatggacttcctcggcctgcggaacctgacgatcctcgacgacgccctg
gagaacatccgcctcaacggcaaggagcccgtcgtcatcgaggacgtggccctcgacgac
cgcgacacctacgccctgctctcgcgcggtgagaccctcggggtgttccaactcgacggc
ggcggcatgcgcaccctgctgcggcagatgcgccccgacaacttcgaggacatctcggcg
gtcggcgcgctctaccgcccgggcccgatgggcgcgaactcccacacgaactacgccctg
cgcaagaacggcctgcagccgatcaccccgctgcatccgggcctcgcgggcccgctcgac
gacattctcggtaccacctacggcctgatcgtgtatcaggagcaggtcatggagatcgcc
cagaagctcgccgggtacacgctcgggcaggccgacctgctccgccgagcaatgggaaag
aagaagaaggaggtgctcgacgccgagtacattccattctcgggcggaatgcgcgcgaac
ggctacaccgacgccgccatccaggcgctgtgggacgtgctcgtgccgttctccgactac
gcattcaacaaggcccactccgcggcctacggcgtggtctcctattggaccgcctacctc
aaggcgaactacccggtcgagtacatggccgcgctcctcacctcgaccagggtcgacaag
gacaagtcggcgctgtacctcaacgagtgccggcacatgcgtatcacggtgctgccgccc
gacgtcaatgactccgtgggaatgttcaccgccgtcggggcggatatccgattcgggatg
gcggccgtgcgcaacgtcggcgagaacgtcgtggccggaatcatcgcggcgcgcgaggag
aagggcgccttcacctccttcagcgacttcctcgagaaggtcccggcccaggtgtgcaac
aagcgcacgatcgaatcgctcatcaaggccggcgccttcgattccctcggccacacccgc
cggtcgctgctcatgatctacgagcaggcgatcgacgcgatcgtcggcgtcaagcgcaag
gaggccgaggggcagttcgacctgttcgcctccctcgacggcccggacgagggcgcgacc
ttcgccgtcgaggtgcccgacctgcccgagtgggagaagaagcagaagctcaccttcgag
cgggagatgctcggcctgtacgtctcggatcacccgctcgcgggcatcgatcacgtgctc
gagcaggccgccgactgctcgatcgcgacgctgaacgaggacgagtcacgcccggacggc
tcccaggtgagcgtcgcggggctcatcacggcggtcgaccggcgcagctccaaggccgga
cgcccgttcgcgatcgtcacggtcgaggacatgaccggaagcatcgagatcatgttcttc
ggggagacgtacctcgcgtacacgaccgccctggcccaggacacggtcatcatcatcaag
ggccgggtccgccgccgggacgaggagatgggcctgcacgcggtcgaggtgaccgtgccc
gacgtcatcgccggcgaccacgcgccggtgcggctgaccatgccgaccatccggtgcacc
gagccgatggtcgagcggctgcgcggggtcctcaccacccacccgggcggatccgaggtt
cagctgtggctcaccgcgggagacaaggccacgatcatgcgtctggacgacgggttgcgg
gtcgagcgcaatgccgcactcttcggggagctcaaggccctgctcggtccgaattgcctc
aactga
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