KEGG   Pseudactinotalea sp. HY158: GCE65_10350
Entry
GCE65_10350       CDS       T06271                                 
Name
(GenBank) DEAD/DEAH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
psei  Pseudactinotalea sp. HY158
Brite
KEGG Orthology (KO) [BR:psei00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:psei03400]
    GCE65_10350
Enzymes [BR:psei01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     GCE65_10350
    5.6.2.6  RNA 3'-5' helicase
     GCE65_10350
DNA repair and recombination proteins [BR:psei03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    GCE65_10350
SSDB
Motif
Pfam: DEAD_assoc WHD_Lhr DEAD Helicase_C WHD_2nd_Lhr ResIII DUF6406 NAD_binding_3 AAA_25 AAA_22
Other DBs
NCBI-ProteinID: QGH69860
LinkDB
Position
2349106..2352372
AA seq 1088 aa
MNSSDALAGFSPVARAWFTGAFPEPTPAQAGTWEAVSSGDHALVVAPTGSGKTLAAFFWA
LDRLATEPTPEPALRCRVLYVSPLKALAADIERNLRAPLAGMRALGPATGAAGDLRVGVR
TGDTPASERRSMATRPPDILITTPESLFLMLTSGARAGLRGVRTVIVDEIHVLAGTKRGA
HLALSLERLDLLLERPAQRIGLSATVRPPGDVAAFLAGHRDRADGGRDVRVIAPGQGPQV
EIDIAVPVPDLTDLAAAPTTGPPTGRAIGPAIGPAIGPAIGPVIGPVIGQDSGPGADLSG
DAAGARREPGSIWPHVTSRLVDLITAHRSTIVFANSRRGAERLTARINEEAAARAGVGDV
DAGAAGSAGSTGSAGSTWAAQLPGQAGTALPVPAARVLARAHHGSMSRSERTAIETALKQ
GTLPAVVATSSLELGIDMGSVDLVVQVGAPPSVASTLQRIGRAGHQVGEASRGVVIPTHR
GELLAAATTCLRARAGLIERSHVLSNPLDVLAQHIVAITALDPVTMSELAELARRADPFH
TLTEATLVAVVDMLSGRYPSEEFAELRPRVVWDRVSDTLTGRPGAQRLATTSGGTIPDRG
LYGVYVAGEGGAAARGGKRVGELDEEMVYESRAGDTFTLGSSTWRIEEITPDRVLVSPAP
GLPGRLPFWRGDSPARPAELGRALGERLAELEEADFDPAAIAGWGLDEWASANLLAYLRE
QRASATRLATHEVLVVERFRDELGDWRIVIHSPWGAQVHAPWAIVLAARLRERFGDVAAM
HTDDGIVLRLPDTEEAIDPFDPLALPTGTDVGADDSGGLSGPGGPGRPGGGARVELEELL
LEPEEVRSLVVDALGGSAHFAARFREAAARSLLLPRRRPDRRRPLWQQRQRAAQLLAVAA
GFPQFPVMLEAVRECLSDDFDVAALVELMTAVRQRRVRVVEVETAAPSPFAKSLLFGYVA
QFVYDGDAPLAERRAAALTLDPGLLSDLLGDGFGGPGGLADLLDPEAIASVEAEVGLRTE
AWRITSAEQLVDVLRLAGPERGRPGAAGRGARGRARLAGRPRAVAARPAGARRRPGGVGG
DRGRRPVA
NT seq 3267 nt   +upstreamnt  +downstreamnt
gtgaactcctcggatgcgctggccgggttcagcccggtcgcccgtgcctggttcaccggt
gcgttcccggagcccaccccggcccaggcgggcacgtgggaggccgtctcctcgggcgat
cacgcgctcgtcgtcgccccgacgggctcgggcaagaccctcgcggcattcttctgggcg
ctcgaccggctcgccacggagccgacgcccgagccggcgctgcgatgccgcgtgctgtac
gtctcgccgctcaaggcgctcgcggcggacatcgagcgcaacctccgggcgccgctggcg
gggatgcgcgcgctcggccccgcgaccggcgcggcgggagacctccgcgtcggggtccgc
accggcgacacccccgcctccgaacggcgctcgatggccacgcggccgccggacatcctc
atcaccacgccagagtccctgttcctcatgctcacctccggggcgcgggcggggttgcgc
ggggtgcgcaccgtcatcgtcgacgagatccacgtgctcgccggcacgaagcggggcgcc
cacctggccctctccctcgagcggctcgacctcctgctcgagcggccggcgcagcggatc
gggctgtcggccacggtgcgcccgccgggcgacgtggccgccttcctcgccggccaccgc
gaccgggccgacggcggccgggacgtccgcgtgatcgcgcccggtcaggggccgcaggtg
gagatcgacatcgccgttccggtccccgacctgaccgacctcgccgccgcgccgacgacc
gggccaccgaccggccgggcgatcggcccggcgatcggcccggcgatcggcccggcgatc
ggcccggtgatcggcccggtgatcggccaagactcgggcccgggcgccgacctgagtggt
gacgcggccggcgcccggcgcgaacccgggtcgatctggccgcatgtcacctcccggctc
gtcgacctcatcaccgcacaccggtccacgatcgtgttcgcgaactcccggcgcggcgcc
gaacgtctcacggcccgcatcaacgaggaggcggccgcgcgggcgggcgtgggcgacgtc
gacgcgggcgcggcgggctcagcgggctcgacgggctcggcgggctcgacctgggcggcc
cagctccccggccaggcgggcacggctctcccggtccccgcggcccgcgtgttggcccgc
gcccaccacgggtcgatgagccgcagcgaacggaccgcgatcgagaccgccctgaagcag
ggcaccctgcccgcggtcgtggccacgagttccctcgagctcgggatcgacatgggcagc
gtcgacctcgtggtgcaggtcggggcgcccccgagcgtggcgagcacgctccagcggatc
ggtcgggccgggcaccaggtgggtgaggcctcccgcggggtcgtcatcccgacccaccgc
ggcgagctgctcgccgcggccaccacctgcctgcgtgcccgcgccggcctgatcgaacgc
agtcacgtgctgagcaacccgctcgacgtgctcgcccagcacatcgtcgcgatcaccgcc
ctcgaccccgtgacgatgtccgagctggccgagctcgcgcgccgggccgacccgttccac
accctgaccgaggcgaccctcgtcgccgtcgtggacatgctctcgggcaggtacccgagc
gaggagttcgccgaactgcgaccgcgcgtggtgtgggaccgggtgagcgatacgctcacc
ggccggccgggcgcgcagcggctcgcgaccacgagcggcgggacgatcccggaccggggg
ctctacggggtctacgtcgccggcgagggcggcgccgcggcccggggcggcaagcgggtg
ggtgaactcgacgaggagatggtctacgagtcgcgcgccggcgacacgttcaccctcggg
tcctcgacgtggcggatcgaggagatcaccccggaccgcgtgctcgtctcccccgccccc
gggctgccgggccggctgccgttctggcgcggcgactccccggcccgccccgcggagctg
ggccgggccctcggcgagcggctggcggagctggaggaggccgacttcgatcccgccgcg
atcgccggctgggggctggacgagtgggcgagtgcgaacctgctcgcctacctgcgcgag
cagcgggcgagcgcgacgaggctggccacccacgaggtgctcgtggtggagcggttccgc
gacgagctgggcgattggcggatcgtcatccactccccctggggcgctcaggttcacgcg
ccgtgggcgatcgtgctcgcggcccggctgcgcgagcggttcggggacgtggcggcgatg
cacaccgacgacgggatcgtgctgcggctgccggacaccgaggaggcgatcgacccgttc
gacccgctcgccctcccgaccggcaccgatgtgggcgcggatgactcgggcggcctcagt
ggcccgggcggcccaggtagaccgggaggcggggcacgggtcgagctggaggagctgctg
ctcgagccggaggaggtccgctcgctcgtggtcgacgcgctcggcgggtcggcccatttc
gcggcccggttccgcgaggccgccgcccgctccctgctgttgccgcggcggcgtccggat
cggcgccggcccctgtggcagcagcggcagcgcgcggcccagctgctggccgtggcggcc
ggattcccgcagttcccggtcatgctcgaggcggtccgggagtgcctgagtgacgacttc
gacgtcgccgcgctcgtcgagctcatgacggcggtgcggcagcgccgggtccgggtcgtc
gaggtcgagaccgccgcgccctcaccgttcgcgaagtcgctgctgttcgggtacgtggcc
cagttcgtctacgacggcgacgccccgctcgccgagcgtcgcgcggcggccctcaccctc
gacccgggcctgctctccgacctgctcggtgacgggttcggcggccccggcggcctggcc
gacctgctcgatccggaggcgatcgcctcggtcgaggcggaggtggggctgcgcaccgag
gcgtggcggatcacctccgccgagcagctcgtcgacgtgctccggctcgccgggccggag
cggggacggcctggcgcagcgggccgcggagcccgggggcgtgcccgcctggctggacga
cctcgagcggtcgcggcgcgtcctgcgggtgcgcgtcgccggccgggaggcgtgggcggt
gatcgaggacgccgcccggttgcgtga

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