Pseudactinotalea sp. HY158: GCE65_12780
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Entry
GCE65_12780 CDS
T06271
Name
(GenBank) AAA family ATPase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
psei
Pseudactinotalea sp. HY158
Pathway
psei03420
Nucleotide excision repair
psei03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
psei00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
GCE65_12780
03430 Mismatch repair
GCE65_12780
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psei03400
]
GCE65_12780
Enzymes [BR:
psei01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GCE65_12780
DNA repair and recombination proteins [BR:
psei03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GCE65_12780
MMR (mismatch excision repair)
Other MMR factors
GCE65_12780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
HRDC
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
QGH70272
UniProt:
A0A5Q2VXH8
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Position
complement(2915059..2917110)
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AA seq
683 aa
AA seq
DB search
MSAAPETIASMSVPPPSPPSADELLAALDADQRAVASQLTGPLCVLAGAGTGKTRAITYR
IAHGVAAGRYRPNQVLAVTFTARAAAELRSRLRGLGVPGVQARTFHAAALRQLSYFWPKV
VGGPLPRLVEHKATLISEAGGRLGMKVDRLTIRDLAGEIEWAKVSMLGPDDYAAAATRSG
RGGVAGFDPTTIARLLSVYEDVKTERNVIDFEDVLLLTVGILAEHEDVAAQVRSQYRHFV
VDEYQDVSPLQHQLLGLWLGGREEVCVVGDVSQTIYSFTGASPRYLTEFTRTYPDAHVVR
LVRDYRSTPQVVGVANQVLAAAGHHRAAGAVELVAQREPGPPAAYTSYDDDAAEARGVAS
RIGRLRAAGVPLAEIAVLYRTNGQSEAIEQALSEAGIGYQVHGGQRFFSRREVTEAIVLL
RGAVRATTELSLPQHVRDVLTGAGWTPEPPPNRGSLRDRWESLNALATLADDLFQARGVD
MAGYVDELLERANAQHAPTVQGVTLASLHASKGLEWDAVFLVGVTDGLLPISFADTPAAI
EEERRLLYVGVTRAREHLEFSYSRSRSNGGRGTRKRSRFLDGIWPAEQRRARATTRRRRE
IEQDEDIDEELLARLREWRASVASRLDKPAFTVLHDTTLAAIASAQPKELRQLAILRGIG
PTKLDAYGPQILAVVRGEDPLRG
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atgtcggccgcccctgagacaatcgcctcgatgtctgttcctcccccctcgcccccgtcc
gccgacgaactcctcgccgccctggatgccgatcagcgtgccgtcgcctcccagctcacc
ggccccctgtgtgtgctcgcgggcgccggcacgggcaagacccgggcgatcacctaccgg
atcgcccacggcgtcgcggccggcagataccggcccaaccaggtgctcgcggtcaccttc
accgcccgggcggcggccgagctgcgctcgcggctgcgggggctcggcgtccccggggtg
caggcccgcacgttccacgcggcggcgctgcggcagctgtcctatttctggccgaaggtc
gtcggcggcccgcttccgcggctggtcgagcacaaggccaccctgatctccgaggccggc
gggcgcctggggatgaaggtcgaccggctgaccatccgcgacctcgccggtgagatcgaa
tgggccaaggtctcgatgctcggcccggacgactacgcggccgcggccacgcgctcgggc
cgcggcggcgtggccggcttcgaccccacgaccatcgcccgactgctctcggtctacgag
gacgtgaagaccgaacgcaacgtgatcgacttcgaggacgtgctgctgctcacggtcggc
atcctggccgagcacgaggacgtcgccgcgcaggtccgcagccagtatcgccatttcgtc
gtcgacgagtaccaggacgtctccccgctgcagcaccagctcctcggcctgtggctcggc
ggccgcgaggaggtctgcgtggtcggggacgtctcccagaccatctactccttcacgggc
gcctccccgcggtatctgaccgagttcactcgcacctacccggacgcgcacgtcgtccgg
ctcgtgcgcgactaccgctccaccccgcaggtcgtcggcgtggcgaaccaggtgctcgcc
gcggcgggccaccaccgcgccgcgggcgccgtcgaactcgtggcccagcgcgagccgggc
ccgccggccgcctacacctcctacgacgacgacgccgccgaggcccgcggcgtcgcgtcc
cggatcgggcggctccgagccgctggtgtgccgttggccgagatcgccgtgctctatcga
acgaacggccagtccgaggcgatcgagcaggcactgagcgaggcggggatcggctaccag
gtgcacggcgggcagcggttcttctcccgccgggaggtgaccgaggcgatcgtgctgctg
cgcggggccgtgcgggccaccacggagctgtccctgccgcagcacgtgcgagacgttctc
accggcgccggctggacgcccgaaccgccgccgaaccgcggctcgctgcgtgaccggtgg
gaatccctcaacgccctggccaccctcgcagacgacctgttccaggctcggggcgtcgac
atggccggatacgtcgacgagctgctcgaacgggcgaacgcccagcacgcgccgaccgtg
cagggtgtcaccctcgcctcgctgcacgcctcgaaggggctggagtgggacgccgtgttc
ctcgtcggcgtgaccgacgggctgctgccgatctcgttcgcggacacacccgccgcgatc
gaggaggagcggcggctgttgtacgtgggcgtcacccgtgcccgcgagcacctggagttc
tcctactcgcggtcccgctcgaacggcggccggggcacccgcaagcgctcgaggttcctc
gacggaatctggcccgccgagcagcgccgggcccgggcgaccacgcggcgtcgccgcgag
atcgagcaggacgaggacatcgacgaggagctgttggcgcggctgcgcgaatggcgggcg
tcggtggcgagccggctcgacaagcccgcgttcacggtgctgcacgacaccaccctggcc
gccatcgcctccgcccagcccaaggagctgcgccagctcgcgatcctgcgcggcatcggc
cccacgaaactggacgcctacggtccccagatcctcgcggtcgtccgcggtgaggacccc
ctgcgcggctga
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