Pseudactinotalea sp. HY158: GCE65_12795
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Entry
GCE65_12795 CDS
T06271
Name
(GenBank) hypothetical protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
psei
Pseudactinotalea sp. HY158
Pathway
psei03420
Nucleotide excision repair
psei03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
psei00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
GCE65_12795
03430 Mismatch repair
GCE65_12795
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psei03400
]
GCE65_12795
Enzymes [BR:
psei01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GCE65_12795
DNA repair and recombination proteins [BR:
psei03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GCE65_12795
MMR (mismatch excision repair)
Other MMR factors
GCE65_12795
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD_C
PDDEXK_1
UvrD_C_2
Viral_helicase1
AAA_12
Motif
Other DBs
NCBI-ProteinID:
QGH70274
UniProt:
A0A5Q2W155
LinkDB
All DBs
Position
complement(2919383..2921212)
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AA seq
609 aa
AA seq
DB search
MNDLWAALQVAHDPSRGDVLMRLLTGPGVGIGARDLMALSHWARRQVDRAREHTDREEAE
QASIVEAIEHPPPPGWVSPAGHDLSDPARDRLGDLAGVLRAIRSLAQLPLPELVLATERL
LGLDIEVLAHAAAGTRNPRTHLDEFVAVAADFQRFAGASMHVGGGSTLAAFLAWLDVAYE
EEKGLATAEIEPDPRAVQVMTIHASKGLEWDAVVVAGLNEGDFPKTAPNRQGDRLSKGWL
THASLLPYELRGDVDHLPAFDHEQALTHGELAGVWADFLHAEGDRLVREDRRLAYVALTR
ARDHLLLTGSFWSGRKEANTPSLFLGEAVRAGADTGGPWPVASVHEGDPATSAGAEARWP
GPGPSRDYWQRLLAGEAPAADPLIDAWRDEAELLLAERDAAAPPAATGAGHLSASAVVRL
AQDAETFERNRRRPVPMEPSTHARRGTTFHAWVERYFGASTLLDWEVLPGADDETAGESD
VEELITAFHASAWAARSPIRVEADLHTPIGGRIIRCRIDAVFRDEDGADHIVDWKTGAPA
RTAEEQEARDLQLALYRLAWARAHDLPLDRVRASYHYVAANRTVAGSDLGEDAILEVLAR
FGEPVQAGG
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgacctgtgggcggccctgcaggtcgcccacgatcccagccgcggcgacgtgctc
atgcggctgctcaccgggcccggcgtcgggatcggcgcgcgcgacctcatggcgctgtcg
cactgggcgcgcaggcaggtcgatcgagcgcgcgagcacaccgaccgggaggaggccgag
caggcgagcatcgtcgaggcgatcgagcacccgcccccacccggatgggtctctccggca
gggcacgacctctccgaccccgcccgtgatcggctgggcgacctcgccggtgtgctccgg
gcgatccgctcgctggcccagctcccactgccggaactggtgctcgcgaccgaacggctt
ctgggcctggacatcgaggtgctcgcccatgccgccgccggcacccggaacccgcggacc
cacctcgacgagttcgtcgccgtcgccgcggacttccagcggttcgccggagcctccatg
cacgtgggcggcggcagcacgctggcggccttcctcgcgtggctcgacgtcgcgtacgag
gaggagaaggggcttgcgaccgccgagatcgaacccgacccgagggccgttcaggtgatg
acgatccacgcctccaaggggctcgaatgggatgcggtcgtcgtggccgggctcaacgag
ggcgacttccccaagaccgcaccgaaccggcagggcgaccggctctcgaagggctggctg
acccacgcctcgctgctgccgtacgaactgcgcggcgacgtcgaccacctgcccgcgttc
gaccacgaacaggcgctcacccacggcgagctggccggggtctgggcggacttcctccat
gccgagggggaccgcctcgtgcgtgaggaccgccgactggcatacgtcgcgctcacccgg
gcccgcgatcacctgctgctcaccggctccttctggagcgggcgcaaggaggcgaacacg
ccctcgctgttcctgggggaggcggtgcgtgcgggcgccgatacggggggaccgtggccg
gtggcctcggtccacgagggcgacccggcgacgtccgcgggggccgaggcgcgctggccc
ggcccggggccgtcccgcgactactggcagcggctcctcgcgggcgaggcgccggcggcc
gatccgctcatcgacgcgtggcgcgacgaggccgagctgctgctggccgaacgggacgcc
gccgcaccgccggccgcgaccggcgccggccacctgagcgcctcggccgtggtgcgcctc
gcccaggacgccgagacgttcgagcgcaatcggcgccggcccgtgccgatggagccgagc
acccacgcccgccggggcacgaccttccacgcgtgggtcgagcgctatttcggtgcctcg
accctgctcgactgggaggtgctgcccggggcggacgacgagaccgcgggcgagtccgat
gtcgaggagctcatcacggccttccacgcctccgcctgggccgcgcgcagcccgatccgg
gtcgaggccgacctgcacacgccgatcgggggccggatcatccggtgccggatcgatgcg
gtgttccgcgacgaggacggcgccgaccacatcgtcgactggaagacgggcgcgccggcc
cgcactgccgaggagcaggaagcacgcgatctgcagctggcgctgtaccgactcgcgtgg
gcacgcgcgcacgacctacccctggaccgggtgcgcgcctcctaccactacgtggcggcg
aaccgcacggtggccggctccgacctcggggaggacgcgatcctcgaggtcctcgcccgg
ttcggtgagccggttcaggccgggggctga
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