Pseudactinotalea sp. HY158: GCE65_13740
Help
Entry
GCE65_13740 CDS
T06271
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
psei
Pseudactinotalea sp. HY158
Pathway
psei03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
psei00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
GCE65_13740
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psei03021
]
GCE65_13740
03400 DNA repair and recombination proteins [BR:
psei03400
]
GCE65_13740
Enzymes [BR:
psei01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
GCE65_13740
Transcription machinery [BR:
psei03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
GCE65_13740
DNA repair and recombination proteins [BR:
psei03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
GCE65_13740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Cluap1
Motif
Other DBs
NCBI-ProteinID:
QGH70436
UniProt:
A0A5Q2W1P6
LinkDB
All DBs
Position
complement(3118694..3122575)
Genome browser
AA seq
1293 aa
AA seq
DB search
MLDVNAFDELRIGLATVDEVRAWSHGEVKKPETINYRTLKPEKDGLFCEKIFGPTRDWEC
YCGKYKRVRFKGIICERCGVEVTRSKVRRERMGHVELAAPVTHIWYFKGVPSRLGYLLDL
APKDLEKVIYFAAYMITWVDEEGRHEDLPSLQNEIALERTELESQRDLAIAQRGERLETD
LAELEAEGAKADARRKVRDSAEREMAQIRKRAENELDRLQRVWDRFANLKVADLEGDEML
YRELQDRYGNYFRGSMGAEAIQRRLETFDLAAEAESLRETIRSGKGQRKTRALKRLKVVN
AFLTTNNSPLGMVLDAIPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDL
GAPEIIVNNEKRMLQEAVDSLFDNGRRGRPVTGPGNRPLKSISDMLKGKQGRFRQNLLGK
RVDYSGRSVIVVGPQLKLHQCGLPKQMALELFKPFVMKRLVDLNHAQNIKSAKRMVERAR
PVVWDVLEEVITEHPVLLNRAPTLHRLGIQAFEPQLVEGKAIHLHPLVCGAFNADFDGDQ
MAVHLPLSTEAQAEARILMLSSNNILKPSDGRPVTMPSQDMIIGLYHLTVGKDGAPGEGR
SFTNPAEARMAFDAGELDLNAQITVRVSDFVPGADVEVPEGWNPSEPMTLSTTLGRTIFN
EALPIDYPYINEVVDKKQLSGIVNDLAERYPKVEVAASLDALKEAGFGWATRSGVTIAIS
DVVTPDAKAGILEAYEARAAKVQGQYDRGLTTDDERRNELIEIWTQATNEVDVAMRANFP
QENAVNTMVGSGARGNWMQVRQIAGMRGLVANPKGEIIPRPIKSNYREGLSVLEYFIATH
GARKGLADTALRTADSGYLTRRLVDVSQDVIIRELDCGTERGLVMPIVEKDHHGVARRHE
KVETSVYSRTLAGQVSGADGTVLGSNGDDVGDVLIEGLIAAGVEEIKVRSVLTCESRVGT
CAKCYGRSLATGKLVDIGEAVGIIAAQSIGEPGTQLTMRTFHTGGVASAEDITQGLPRVT
ELFEARTPKGEAPIAEMAGRVGIEDTDRSRRIIVTPDDGSEEIVEQVSKRARLLVGDGEH
VSVGQQLVAGAVDPKKVLRILGPRAVQKHLVDEVQLVYGSQGVDIHNKHIEVIVRQMLRR
VTVLDSGESRLLPGELAERGRFEDENRRVVSEGGVPASGRPELMGITKASLATDSWLSAA
SFQETTKVLTEAAMSGRSDSLLGLKENVILGKLIPAGTGLARYRDIKVEPTEEAKAELYP
SFGYDEIDYAPLPDVGDPIALEELDLGGFTDFR
NT seq
3882 nt
NT seq
+upstream
nt +downstream
nt
gtgctcgacgtcaacgcgttcgacgagcttcgtatcggtctggccaccgtggacgaagtt
cgtgcctggtcccacggtgaagtgaagaagccggagaccatcaactaccgcacgctcaag
cccgagaaggacggcttgttctgcgagaagatcttcggacccacccgtgactgggaatgc
tactgcggcaagtacaagcgggtccggttcaagggcatcatctgtgagcggtgcggtgtg
gaggtcacccgctcgaaggtccgccgcgagcggatgggccacgtcgagctcgccgcgccc
gtcacccacatctggtacttcaagggcgtgccgtcgcggctgggctacctgctcgacctc
gccccgaaggacctcgagaaggtcatctacttcgcggcctacatgatcacgtgggtcgac
gaggagggccggcacgaggacctgccgagcctgcagaacgagatcgccctcgagcgcacc
gagctcgagtcgcagcgcgacctggccatcgcccagcgcggtgagcggctcgagaccgac
ctggccgagctcgaggccgagggcgcgaaggccgacgcccgccgcaaggtgcgcgattcc
gccgagcgcgagatggcgcagatccgtaagcgcgcggagaacgagctcgaccggctccag
cgggtctgggaccggttcgcgaacctcaaggtcgccgatctcgagggcgacgagatgctc
taccgcgagctccaggaccgctacgggaactacttccggggctccatgggggcggaggcg
atccagcgccgactggagaccttcgacctcgcggccgaggccgaatcgctgcgggagacc
atccggtccggcaagggacagcgcaagacgcgggcgctcaagcgcctcaaggtcgtcaac
gcgttcctcaccacgaacaactccccgctcgggatggtgctcgacgcgatcccggtgatc
ccgccggacctgcgcccgatggtccagctcgacggtggccgcttcgccacctccgacctg
aacgacctctaccgccgggtcatcaaccggaacaaccgcctcaagcggctcctcgacctg
ggcgcgccggagatcatcgtcaacaacgagaagcgcatgcttcaggaggccgtcgactcg
ctgttcgacaacggccgccgtggtcggccggtgaccggaccggggaaccgtccgctcaag
tcgatctccgacatgctcaagggcaagcagggccggttccgtcagaacctgctcggcaag
cgcgtcgactactcgggtcgaagcgtcatcgtcgtcgggccgcagctcaagctgcaccag
tgcggtctgcccaagcagatggcgctcgagctgttcaagccgttcgtgatgaagcgcctg
gtcgatctcaaccacgcccagaacatcaagtcggccaagcggatggtcgagcgcgcccgc
ccggtcgtgtgggacgtcctcgaggaggtcatcaccgagcacccggtgctcctcaaccgt
gcgcccaccctgcaccggctcggcatccaggccttcgagccgcagctggtcgagggcaag
gccatccacctgcacccgctcgtttgcggcgcgttcaacgccgacttcgacggcgaccag
atggccgtgcacctgccgttgagcacggaggcccaggccgaggcccggatcctcatgctc
tcgagcaacaacatcctcaagccctcggacgggcgcccggtgaccatgcccagccaggac
atgatcatcggcctgtaccacctgaccgtgggcaaggacggcgcacccggcgagggccgg
agcttcacgaacccggccgaggcgcggatggcgttcgacgccggcgagctcgacctcaac
gcacagatcaccgtgcgggtctcggacttcgtgccgggtgccgacgtcgaggttcccgag
ggctggaacccgagcgagccgatgaccctgtccaccaccctgggccggaccatcttcaac
gaggcgctgccgatcgactacccgtacatcaacgaggtcgtcgacaagaagcagctctcg
ggcatcgtcaacgacctcgcggagcgctacccgaaggtcgaggtcgccgcgagcctcgat
gcgctcaaggaggccggattcggctgggccacccgttcgggggtgacgatcgcgatctcc
gacgtcgtcacgccggatgccaaggcgggaatcctcgaggcctacgaggcccgtgccgcg
aaggtccagggccagtacgaccgcggtctgaccaccgacgacgagcgtcgcaacgagctc
atcgagatctggacccaggcgaccaacgaggtcgacgtggcgatgcgggcgaacttcccc
caggagaacgccgtcaacacgatggtcggctccggcgcccgcggcaactggatgcaggtc
cgccagatcgcgggaatgcgcggcctcgtggccaacccgaagggcgagatcatcccccgc
ccgatcaagtcgaactaccgtgagggactgtcggtcctcgagtacttcatcgccacgcac
ggtgcccgcaagggcctggcggacacggcgctgcggaccgcggactccggatacctcacg
cgtcgcctcgtcgacgtctcccaggacgtcatcatccgcgagctcgactgtggcaccgaa
cggggcctcgtcatgccgatcgtggagaaggaccaccacggtgtcgcccgtcgtcacgag
aaggtcgagacgagcgtgtactcgcggaccctcgcggggcaggtgagcggcgccgacggc
accgtgctgggctccaacggcgacgacgtcggagacgtcctcatcgagggactcatcgcg
gccggcgtcgaggagatcaaggtccgttcggtgctcacgtgcgagtcccgggtgggtacc
tgcgccaagtgctacgggcggtcgctggccacgggcaagctcgtggacatcggcgaggcc
gtcggcatcatcgcggcccagtcgatcggtgagccgggaacccagctgacgatgcgcacc
ttccacaccggtggtgtcgcgtcggcggaggacatcacccagggtctgccgcgtgtgacc
gagctcttcgaggcccgcacccccaagggggaggcgccgatcgccgagatggccggccgg
gtcggcatcgaggacaccgaccggtcccgccggatcatcgtcaccccggacgacggcagc
gaggagatcgtcgaacaggtctccaagcgtgcccggctgctcgtcggcgacggcgagcac
gtctcggtcggtcagcagctcgtggccggcgcggtcgacccgaagaaggtgctgcgcatc
ctcggcccgcgggccgttcagaagcacctggtcgacgaggtgcagctggtctacggttcg
cagggtgtggacatccacaacaagcacatcgaggtcatcgtgcggcagatgctgcggcgc
gtgaccgtgctcgactcgggcgagtcgcggctgctgcccggtgaactggccgagcgtggc
cggttcgaggacgagaaccgccgggtcgtctccgaagggggcgtgccggcctccggtcga
ccggagctcatgggaatcaccaaggcctcgctggcgacggactcgtggctgtcggccgcg
tcgttccaggagacgaccaaggtgctgaccgaggccgcgatgagcggtcggtcggactcc
ctgctcggcctcaaggagaacgtcattctcgggaagctcatccccgccggcacgggcctc
gcccgctaccgggacatcaaggtggagccgaccgaggaggcgaaggcggagctctacccg
agcttcggctacgacgagatcgactacgcgccgctgcccgacgtcggcgacccgatcgcg
ctcgaggaactcgacctcggcggattcacggacttccgctga
DBGET
integrated database retrieval system
