KEGG   Pseudomonas sediminis: HNQ25_00790
Entry
HNQ25_00790       CDS       T07154                                 
Symbol
polA
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
psej  Pseudomonas sediminis
Pathway
psej03030  DNA replication
psej03410  Base excision repair
psej03420  Nucleotide excision repair
psej03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:psej00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    HNQ25_00790 (polA)
   03410 Base excision repair
    HNQ25_00790 (polA)
   03420 Nucleotide excision repair
    HNQ25_00790 (polA)
   03440 Homologous recombination
    HNQ25_00790 (polA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:psej03032]
    HNQ25_00790 (polA)
   03400 DNA repair and recombination proteins [BR:psej03400]
    HNQ25_00790 (polA)
Enzymes [BR:psej01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     HNQ25_00790 (polA)
DNA replication proteins [BR:psej03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     HNQ25_00790 (polA)
DNA repair and recombination proteins [BR:psej03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     HNQ25_00790 (polA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     HNQ25_00790 (polA)
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_pol_A_exo1 5_3_exonuc DNA_polI_exo1
Other DBs
NCBI-ProteinID: QNH01291
UniProt: A0A7G7RET9
LinkDB
Position
complement(163376..166171)
AA seq 931 aa
MSQAPLVLVDGSSYLYRAFHALPPLTTSKGMPTGAVKGVLNMLKSLRKQYPNSPFAVVFD
AKGGTFRDELFAEYKANRPSMPDELRVQVEPLHASVRALGLPLLCVEGVEADDVIGTLAR
QAAGEKRDVVISTGDKDMAQLVCPHVTLVNTMTGSVYDADGVKEKFGVGPELIIDYLALM
GDKVDNIPGVPGVGEKTALGLLVGIGGGLDVLYANLDKVPELPIRGAKGLPAKLEEHREM
AYLSYQLATIKTDVPLNIEIESLHPGEPDQAALVELYGELEFKNWLDDLLRQNKALVAKA
AAPAGDLFAEPTGDTVEETTEPAPASSGDYQLVLEQAQLDAWLKKLEQAELIAFDSETTS
IDAQQAQLVGLSFAVKAGEAAYIPLAHSYMGVPQQLDRDAVLKALKPILEDPAKAKVGQH
AKYDINVLANASTPITVQGVAFDTMLESYVLDSTATRHDMDSLALKYLNHSTIRFEDIAG
KGAKQLTFDQIALEQAGPYAAEDADVTLRLHQELWGRLEAVPSLAKVLRDIEIPLVPVLA
RIERNGALVDAKLLGEQSVELGEKLVELERKAFEIAGEEFNLASPKQLGVILYEKLGYPV
ISKTAKGQPSTAEAVLAELAEQDYELPKVLMQYRSLSKLKSTYTDKLPEQINPRTGRIHT
SYHQAVAATGRLSSSDPNLQNIPIRTAEGRRIRQAFVAPKGYKLMAADYSQIELRIMAHL
AKDKGLLDAFHHDLDVHRATAAEVFGVALEEVSSDQRRKAKAINFGLIYGMSAFGLAKQI
DVERKEAQAYIDRYFARYPGVLTYMESTRAQAAEQGYVETVYGRRLYLPEIHAQNQAMRK
GAERAAINAPMQGTAADIIKRAMIAVDSWLQDSSIDARIIMQVHDELVLEVREELIDEVS
AKLKSLMSGAADLDVPLLVEVGVGANWDEAH
NT seq 2796 nt   +upstreamnt  +downstreamnt
atgagccaagctcccctcgttctggtcgacggttcctcttatctgtaccgcgccttccac
gccctgccgccgctgaccacttccaagggcatgcccactggagcggtgaagggcgtgctg
aacatgctcaagagcctgcgcaagcagtacccgaacagcccctttgccgtggtcttcgac
gccaagggcggcaccttccgcgacgagctgttcgccgagtacaaggccaatcggccatcc
atgccggacgaattgcgcgtccaggtcgagccgctgcacgccagcgtgcgtgccctgggg
ttgccgctgctgtgcgtcgagggggttgaagccgatgacgtgatcggcaccctggcgcgc
caggcggccggggaaaagcgcgacgtggtcatctccactggtgacaaggacatggcgcag
ctggtctgcccgcacgttacgctggtcaacaccatgacgggaagcgtctacgatgccgat
ggcgtaaaggagaaatttggtgtcggccctgagctgatcatcgactacctggcactgatg
ggcgacaaggtcgacaacatcccaggcgtacccggtgtcggtgagaaaaccgctttgggc
ctgctggttggtatcggcggcggcctcgacgtgctctacgccaacctcgacaaggtgccc
gagctgccgatccgtggcgccaagggcctgccagccaagctcgaagagcaccgcgagatg
gcctacctgtcgtatcagctggcgaccatcaagaccgacgtgccgctgaatatcgagatc
gagtcgctgcatcccggcgaaccggatcaggccgcgctggtggagctttacggcgaactg
gagttcaagaactggctggacgacctgctgcgtcagaacaaggcgctggtggccaaggct
gctgcgccggctggcgatctgttcgccgagccgactggtgacaccgttgaggaaaccacc
gagccagcgccagccagcagtggtgattaccaactggtgctggagcaggcgcagctcgat
gcctggctgaagaaactggagcaggcagagctgatcgccttcgacagcgagaccaccagc
atcgacgcccagcaggcgcaactggtcggcctgtccttcgcggtcaaggccggcgaagcg
gcctatatcccgctggcgcactcctacatgggtgtgccgcagcagctggatcgcgacgcg
gtgctcaaggcgctcaagccgatcctcgaagacccggccaaggccaaggtcggccagcac
gccaagtacgacatcaacgtcctggccaacgccagcacaccgatcacggtgcagggcgtg
gcctttgacaccatgctcgaatcctacgtactggattcgacggcgacgcgccacgacatg
gacagcctggcgctgaagtacctgaaccacagcaccatccgcttcgaagacatcgccggc
aaaggcgccaagcagctgaccttcgaccagattgccctggaacaagccggcccgtacgcc
gccgaggatgccgacgtgaccttgcgtctgcaccaggaactgtggggacgcctcgaagct
gtgccgtccctggccaaggtgctgcgtgacatcgaaatcccgctggtaccggtgctggcg
cgcatcgagcgcaacggcgcgctggtcgatgccaagctgctcggcgagcagagtgtcgag
ctgggcgagaaactggtggagctggagcgcaaggcgttcgagatcgccggtgaggaattc
aacctagcctcacccaaacaactgggcgtgatcctctacgaaaagctcggctacccggtg
atcagcaagactgccaagggccaaccctccaccgccgaagcggtgctggcagaactggcc
gagcaggactacgagttgcccaaggtgctgatgcagtaccgcagcctgagcaagctcaag
agcacctacaccgacaagctgccggagcagatcaacccgcgcaccgggcgtatccatacc
agctatcaccaggcggtcgccgccactggccgcctgtcctccagcgacccgaacctgcag
aacattccgatccgcaccgccgaaggccggcgcatccgccaggccttcgtcgcgcccaag
ggctacaaactgatggcggcggactactcgcagatcgagttgcgcatcatggcccacctg
gccaaggacaaaggtctgctcgatgccttccaccatgatctggacgtgcacagggccact
gctgccgaggtgtttggtgtggcactggaagaggtgagcagcgaccagcggcgcaaggcc
aaggcgatcaacttcggcctgatctacggcatgagcgccttcggcttggccaagcagatc
gacgtcgaacgcaaggaagcgcaggcctacatcgatcgttacttcgcccgctatcccggc
gtgctgacctacatggaaagcacccgcgcgcaggccgccgagcagggttatgtggagacg
gtctacggccgtcgcctgtatctgccggagatccacgcgcagaaccaggccatgcgcaag
ggcgccgagcgcgcggcgatcaatgcgccgatgcagggcacggctgcggacatcatcaag
cgcgccatgatcgccgtggacagctggttgcaggacagcagcatcgatgcacgcatcatc
atgcaggtgcacgacgaactggtgctggaggtgcgtgaggaactgatcgacgaggtcagc
gccaaactcaagagcctgatgagtggcgccgccgacctggatgtaccgctactggtggag
gtcggcgtcggcgccaattgggacgaggcgcattga

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