Pseudomonas sediminis: HNQ25_01070
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Entry
HNQ25_01070 CDS
T07154
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
psej
Pseudomonas sediminis
Pathway
psej02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
psej00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
HNQ25_01070
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psej03021
]
HNQ25_01070
Transcription machinery [BR:
psej03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
HNQ25_01070
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
GerE
HTH_23
HTH_24
HTH_29
HTH_28
Motif
Other DBs
NCBI-ProteinID:
QNH01347
UniProt:
A0ABX6SIP2
LinkDB
All DBs
Position
complement(216071..216577)
Genome browser
AA seq
168 aa
AA seq
DB search
MPADAQVLHTLYRDHHNWLQGWLRRRLGNGCDAADLAQDTFVRLLRAGNAASIREPRDYL
ATVARGLMVDFLRRRSLEQAYLEALANQPQAEHPSAEHQALLLEALMEVDRLLAGLGRTV
REVFILSQLDGLTYAQIAARLRISLRSVNTYMARAVEHCCLLQAGWQP
NT seq
507 nt
NT seq
+upstream
nt +downstream
nt
atgcccgccgacgcccaggtgctgcacaccctctaccgtgaccatcacaactggctgcaa
ggctggctgcgtcggcgcctgggcaatggctgcgatgccgccgacctggcgcaggacacc
ttcgtgcgtctgctgcgtgccggcaatgcggcgagcattcgcgagccacgtgattacctg
gccacggtggcgcgggggctgatggtcgactttctgcggcggcgttcgctggagcaagcc
tatctcgaagcgctggccaatcagccgcaggccgaacaccccagcgccgagcatcaggcg
ctgctcctcgaagcgctgatggaggtcgaccgtctgctcgccggtctcggccgcacggtg
cgcgaggtgttcattctgtcccagctcgacggccttacatacgcgcagattgccgcgcgc
ctgcgcatttccctgcgcagcgtgaacacctacatggcccgcgccgtggagcattgctgt
ctgctgcaggcaggctggcagccgtga
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