Pseudomonas sediminis: HNQ25_01440
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Entry
HNQ25_01440 CDS
T07154
Symbol
tssK
Name
(GenBank) type VI secretion system baseplate subunit TssK
KO
K11893
type VI secretion system protein ImpJ
Organism
psej
Pseudomonas sediminis
Pathway
psej02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
psej00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
HNQ25_01440 (tssK)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
psej02044
]
HNQ25_01440 (tssK)
Secretion system [BR:
psej02044
]
Type VI secretion system
Imp/Vas secretion system core components
HNQ25_01440 (tssK)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
T6SS_VasE
Motif
Other DBs
NCBI-ProteinID:
QNH01420
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Position
300098..301432
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AA seq
444 aa
AA seq
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MSWNNRVIWSEGMFIGTQHFQQHDRYLEALVDARSRPLSAAGWGFADLQLDTGLLAQGKL
AIVSARGLLPDGTPFNIPQDDVAPEPLDIPEDLRDGVIYLALPLRRAGVRDTVEAGEPLG
GARYRGQVREVRDDNAAFESRVPVMVGERALRLLSAADGLQEYAVLGVARVREKRADRAL
VLDEQYIPPLLDVAASAPLAAFRGELLGLLHQRGEALAGRVVASSAGGASEIADFMLLQL
VNRAQPLFAHLAQLQPLHPERLYSELLALAGEFATFSNSGRRPSEFPTYLHDDLQTSFTP
VMQALREALSMLIDSKAVPIPIVEKAYGVHVAMLADRSLLDNASFVLVVRADMPAETLRG
RFGQQSKVGSVEHIRDLVNLQLPGINLLPLPVAPRQIPFHAGSTYYELDRGSEHWKQLAH
SGGFAFHVAGEYPGLNLAFWAIRG
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgtcctggaacaaccgtgtgatctggtccgaaggcatgttcatcggcacccagcatttc
cagcagcacgaccgctacctggaggcgctggtcgatgcacgcagccgccccctgtcagcg
gctggatggggctttgccgatctacagctcgatacggggctactggctcaaggcaagctg
gccatcgtcagcgcccggggcctgttacccgacggcacgccgttcaatatcccgcaggac
gatgtggcgccagagccgttggacatccccgaggacctgcgcgacggcgtgatctacctg
gccctgccgctgcgccgggctggcgtgcgtgacaccgtcgaagcaggtgagccgctgggt
ggcgcgcgatatcgcggccaggtgcgcgaagtgcgtgatgacaatgccgccttcgaaagc
cgcgtaccggtgatggtcggcgagcgtgcactgcgactgctgagcgctgccgacggcctg
caggaatacgctgtactgggcgtggcgcgagtccgcgagaaacgcgccgaccgcgccctg
gtgctggacgaacagtacatcccgcccctgctcgatgtggcggcaagtgcgccgctggca
gcctttcgtggcgagctgttgggcctgctgcatcagcgtggcgaagccctcgccgggcgc
gtggtggcctccagcgccggcggcgcctcggagatcgccgacttcatgctgctgcagctg
gtcaaccgcgcccagccgctgttcgcccacctggcccaactgcaacccttgcacccggag
cgcctgtacagcgaactgctggccctggccggtgagttcgccaccttctccaattccggc
cggcgcccctcggagttcccgacctacctgcacgacgacctgcagaccagcttcaccccg
gtgatgcaggcgctgcgcgaagcgctgtcgatgctgatcgacagcaaggccgtgccgatt
cccatcgtcgaaaaggcctacggcgtgcacgtggccatgctggccgaccgcagcctgctg
gacaacgcgagtttcgtcctggtggtacgcgccgacatgcccgccgaaaccctgcgtggc
cgcttcggccagcagagcaaggtcggctcggtcgagcacatccgtgatctggtcaacctg
cagctgccaggcatcaacctgctgccgctgccagtggctccgcggcagattccgttccat
gccggctcgacctactacgagctcgaccgcggcagcgagcactggaagcaattggcacat
tccggcggtttcgctttccacgtggcgggtgaataccccggcctgaacctggccttctgg
gcgatacggggttaa
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