Pseudomonas sediminis: HNQ25_01450
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Entry
HNQ25_01450 CDS
T07154
Symbol
tssM
Name
(GenBank) type VI secretion system membrane subunit TssM
KO
K11891
type VI secretion system protein ImpL
Organism
psej
Pseudomonas sediminis
Pathway
psej02025
Biofilm formation - Pseudomonas aeruginosa
psej03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
psej00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
HNQ25_01450 (tssM)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
HNQ25_01450 (tssM)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
psej02044
]
HNQ25_01450 (tssM)
Secretion system [BR:
psej02044
]
Type VI secretion system
Imp/Vas secretion system core components
HNQ25_01450 (tssM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IcmF-related_N
IcmF-related
IcmF_C
IcmF_helical
Motif
Other DBs
NCBI-ProteinID:
QNH01422
LinkDB
All DBs
Position
302764..306264
Genome browser
AA seq
1166 aa
AA seq
DB search
MKALFGFITRWVIPVLGLIALSLIIWFIGPLLNVLQPAWTRWTLIILLFALWLGWRLFCL
LRERQQERKVLDGLAAQTPPDAASVATAEELATLRQRMDEALALLKKARLGGDERRNLYQ
LPWYVIIGPPGSGKTTALVNSGLNFPLAAQLGAGAIRGVGGTRNCDWWFTDEAVLLDTAG
RYTTQDSHAQVDKAAWLGFLDLLKAQRARRPIDGAFIAISLSDLLQSSDSERAAHVAAIR
SRVQELYSQLGVRFPVYVMLTKCDLVPGFMEFFDDLSREERAQVWGFTFALDDGKSIGGP
LEHFDSEFVALEQRLNQRLVERLQRERDPARRDLIYGFPQQFAAIKSLLGDFLNGVFKPN
AYEERALLRGLYFTSGTQEGSPIDRLIGSMAQSMNLDRQHLARQSGSGRSYFLQHLFSRV
AFAERGLVGVDQKVERRRRWLAIGSLAASVALVLVVSTLWLLSFNANREHIAQVGARTAP
LEQQVRSLSPAQRDVLAVLPLLSAVRNLAGSPPHWAKGLGLYQGDMLEEQAASVYRRLLV
ATFAPRLLSRVEEQLRTGGGSDYLYEGLKAYLMLGGGEQYDAEFIKAWIALDWDQSLPRD
LSGEQRQALDEHLQALFERRPPDARLDQRLIDELRMQLQRLPLAQRVYDRVKRQKLPTGV
SDFRISEAAGRDAALVFTRKSGKALSDPLSGFYTRRGYREAFLLASVGQASVVAEEQWVL
GRQLDSTQDAVNLAADVRQLYMRDYVQQWDALLADLDFVPITSVAQAADVLRILSGPSSP
LKQLLIAVARETDLQQAPESEGVAKAADEGVDQLKQKLGSLLGQTPAGNAVAAVSEIDPV
SSHFAELNSLVSQDPSAPMAIDGLLADLNELYVQLSSMVGASGEALLGEAKNQASAAAAR
VNLTAARQPKLVQGLVGSVVAASTNSMMGGVRNQLNAAWQSDVVNVWRQSLSGRYPMVPS
SQRDATLDDFGQFFGVGGVMDNYFRKYLQPYVDTSARNWRWQPGAAQKLGISAGVLQTFQ
RAALIRDEFFRSGGLQPSVRFELKPVSMDATISQSQLDLDGQLISFDHGPSRPVAVQWPN
PSGIGVVRLSVSPPVEGGRSALTLEGPWAWFRLLDQSELIGGASPDRFNLRVRLDRSSVA
YELRASSAFNPFKSRAVAGFTLPERL
NT seq
3501 nt
NT seq
+upstream
nt +downstream
nt
gtgaaggcgctgttcggattcatcacccgctgggtcatccccgtgctcgggctgatcgcc
ctgagcctgatcatctggttcatcggcccactactcaacgtgctacagccggcctggacg
cgctggacgctgatcatcctgctgttcgccctgtggcttggctggcgcctgttctgtctg
ctgcgcgagcgccagcaggagcgcaaggtgctcgacggcctggctgcgcaaacgccgccg
gacgccgccagcgtggccaccgccgaggagctggcgaccctgcgccagcgcatggacgaa
gccctggcgctgctgaagaaggcacgcctgggcggcgacgaacgacgcaacctgtatcag
ctgccgtggtacgtgatcatcggcccacccggctccggcaagaccaccgcgctggtcaac
tcggggctgaatttcccgctcgcggcgcaactgggcgccggcgccattcgcggtgtgggc
ggcacgcgcaactgcgactggtggttcaccgacgaagcggtgctgctcgacaccgccggg
cgctataccacccaggacagccatgcccaggtggacaaagcagcctggctcggctttctc
gacctgctcaaggcccagcgcgcacgacgccctatcgacggtgccttcatcgccatcagc
ctctccgacctgctgcagagcagtgacagcgagcgcgcggcgcatgtggcggcgatccgc
tcgcgggtgcaggagctgtacagccagctcggcgtgcgcttcccggtctacgtcatgctc
accaagtgcgacctggtgccgggcttcatggagttcttcgatgacctcagtcgggaggag
cgcgcccaggtctggggctttaccttcgccctggatgacggcaagagcatcggcggcccg
ctggagcatttcgacagcgagttcgtcgccctcgaacaacgcctcaaccaacgtctggtc
gagcgcctgcagcgtgaacgcgatccggcccgacgcgacctgatctacggcttcccacag
caatttgcggcgatcaagagcctgctcggcgatttcctcaacggcgtgttcaagcccaat
gcctacgaggagcgagctctgctgcgtggcctgtacttcaccagcggcactcaggaaggc
agcccgatcgatcgcctgatcggcagcatggcgcagagcatgaacctcgaccgccaacac
ctggctcggcagagcggcagtggtcgcagctatttcctccagcacctgttcagccgcgtc
gcattcgccgaacgcggcctggtcggcgtcgaccagaaggtcgagcggcgccgcagatgg
ctggccattggctcactggctgccagcgtggcgctggtactggtggtgagcacgctgtgg
ctgctcagctttaacgccaatcgtgaacatatcgcccaggttggtgcccgcactgcaccg
ctagagcagcaggtgcgcagcctcagcccggcgcaacgcgatgtgctggctgtactgcca
ctgctcagcgctgttcgcaacctggcgggtagcccgccgcactgggccaaaggcctgggt
ctgtatcagggcgacatgctcgaggagcaggccgccagcgtctaccgccgcctgctggtt
gccaccttcgccccgcgcctgctcagccgagtggaggaacagctgcgcacgggtggtggc
tcggactacctctacgaagggctcaaggcctacctgatgcttggtggcggcgagcaatac
gacgccgaattcatcaaggcctggatcgctctggactgggatcagagcctgccgcgcgac
ctgtcgggtgagcaacgccaagccctcgacgaacacctgcaggcgctgttcgagcgacgc
ccgccggatgctcgcctggatcagcggctgatcgacgagctgcgcatgcagctgcaacgc
ctgccgctggcgcagcgggtgtatgaccgagtcaaacggcagaagctgccaaccggggtc
agcgactttcgcatcagcgaagccgccgggcgcgacgccgcactggtcttcacgcgcaag
agcggcaaggcactgagcgacccgctgagcggcttctacacccgccgcggctaccgcgaa
gccttcctgcttgccagtgtcggccaggccagtgtcgtggccgaggaacaatgggtgctg
ggccgtcagctcgacagcacccaggatgcggtgaacctggccgccgatgtacgccagctg
tatatgcgcgattacgtgcaacagtgggatgcgctgctggccgacctcgactttgtgccg
atcaccagcgtcgcccaggcggcggacgtgctgcggatactctcggggccgtcctcgccg
ctcaagcaactgctgatcgcggtagcgcgggaaaccgatctgcagcaagcacccgaatcc
gaaggtgtggccaaggccgccgacgagggtgtcgaccagctcaagcagaagctcggctcg
ctgctcggccagactccggccggcaatgccgtggcggcggtgagcgagatcgatccggtc
agcagtcatttcgccgaactcaacagcctggtcagccaggacccatcggcgccgatggcc
atcgatggcctgctggcggacctcaacgagctctacgtgcagctcagcagtatggtcggc
gccagcggcgaagcgctgctcggcgaggcgaagaaccaggccagtgctgccgcggcaagg
gtcaacctgaccgccgcgcgccagccaaagctggttcagggcctggtaggttcggtcgtc
gccgccagcaccaacagcatgatgggcggggtgcgcaaccagctcaatgctgcctggcag
agcgacgtggtcaacgtctggcggcagtcgctgagcggccgttacccgatggtaccgagc
agccagcgcgacgccacgctagatgatttcggccagtttttcggtgttggcggggtgatg
gacaactacttccgcaagtacctgcagccctacgtcgacacctcggcacgcaactggcgc
tggcagccgggcgcggcgcagaagcttggcatctccgccggcgtactgcagaccttccag
cgtgcggcgctgatccgcgacgaattcttccgcagcggcggcctgcagcccagcgtgcgc
ttcgaactcaagccggtgagcatggatgccaccatcagtcagtcgcagctcgacctcgac
ggtcagctgatcagcttcgaccacggcccgagccgtccggtggcggtgcaatggccgaac
ccgagcggcatcggtgtggtgcgcctgtcggtgtcgccaccagtggaaggcggacgctcg
gccctgaccctggaagggccgtgggcctggttccgcctgctcgaccagtccgagctgatt
ggcggtgcctcgccggatcgtttcaacctgcgcgtacgcctggatcgctccagcgttgcc
tatgaactgcgtgccagcagtgccttcaatcctttcaagagtcgcgcagtggccggcttc
accctgccggagcggctatga
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