KEGG   Pseudomonas sediminis: HNQ25_01870
Entry
HNQ25_01870       CDS       T07154                                 
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
  KO
K10126  two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
Organism
psej  Pseudomonas sediminis
Pathway
psej02020  Two-component system
Brite
KEGG Orthology (KO) [BR:psej00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    HNQ25_01870
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:psej02022]
    HNQ25_01870
Two-component system [BR:psej02022]
 NtrC family
  DctB-DctD (C4-dicarboxylate transport)
   HNQ25_01870
SSDB
Motif
Pfam: Sigma54_activat Response_reg Sigma54_activ_2 HTH_8 AAA_5 FleQ Mg_chelatase AAA_2 AAA_16 DUF3303
Other DBs
NCBI-ProteinID: QNH01503
UniProt: A0A7G7RFF1
LinkDB
Position
396969..398309
AA seq 446 aa
MSAQVIVVDDEAAIREAVQQWLELSGFEVRACASASEALALVDRDFPGIVVSDVRMPGSD
GLQLLDKLLQIDSDLPVILVTGHGDVPMAVQALRQGAYDFIEKPFTPERLLDSVRRALDK
RRLVCENRQLRQQVADKGRIESQLIGISRPMENLRRQILELAGTSVNVLIRGETGSGKER
VARSLHDFSSRASKAFAALNCAAIPETIFESELFGHESGAFTGAQAKRIGRIEHADGGTL
FLDEVESLPLAQQVKLLRVLQEKTLERLGSNKSIQVDLRVISAAKPDLLDEVKAGRFRED
LVYRLNVATLHIPPLRERREDIPLLFEHFAHEAALRHGREAPPLAPSELARLLGHDWPGN
VRELINAAERHALGLSSPPPAERFAGQALAQQMEAFEAQCLHNALLQCQGNIAAVMEMLQ
LPRRTLNEKMQRHGLARGEYLPGGEE
NT seq 1341 nt   +upstreamnt  +downstreamnt
atgagcgctcaggtcatagtggtcgacgatgaagcggcgattcgcgaggcggtgcagcag
tggctggaactgtccggtttcgaggtacgcgcctgcgccagtgcgagcgaggccctggcc
ctggtcgaccgcgacttccccggcattgtcgtcagcgatgtgcgcatgcccggcagtgac
ggactgcaactgctcgacaagctgctgcagatcgacagcgacctgccggtgatcctggtt
actggccacggtgacgtacccatggcggtgcaggcactgcgccagggcgcttatgatttc
atcgaaaaacccttcacccctgagcgtctgctcgacagcgtacggcgtgctttggataag
cgccggctggtctgcgagaaccgccagctacgccagcaggtggccgacaagggccgtatc
gaaagccagctgatcggcatttcgcggccgatggaaaacctgcgtcggcaaatcctcgaa
ctggccggcacctcggtcaacgtgctgattcgtggcgagaccggcagcggcaaggagcgt
gtagcgcgtagcctgcacgacttcagctcacgggccagcaaggccttcgccgcgctcaac
tgtgcggcgattccggagaccatcttcgagagcgagctgttcggtcacgagagcggcgcc
ttcaccggcgcccaggccaagcgcatcggccgcattgagcatgccgatggcggcacgctg
ttcctcgacgaggtggagagtctgcctctggcgcaacaggtcaagttgctgcgcgtgctg
caggaaaagaccctggaacgcctcggttcgaacaagagcattcaggtcgacctgcgggtg
atcagcgcggccaagccggacttgctcgacgaggtcaaggccgggcgcttccgcgaggac
ctggtgtaccgcctgaacgtcgccaccctgcatattccgccgctgcgcgagcgccgcgag
gatattccgctgctgttcgagcatttcgcccacgaggcggcgctgcgtcatggtcgcgaa
gcgccgccgctggcgccgagcgaactggcgcggctgctcgggcatgactggccgggcaat
gtgcgtgagctgatcaacgccgccgagcgccatgccctggggttgtccagcccgccgccg
gccgagcgctttgccggccaggccctggcgcagcagatggaggccttcgaggcgcagtgc
ctgcataacgccctgctgcaatgccagggcaatatcgccgcagtgatggaaatgctgcag
ctgccgcggcgtaccctcaacgagaaaatgcagcgtcatggcctggcgcgtggtgagtac
ctgccgggtggagaagagtag

DBGET integrated database retrieval system