Pseudomonas sediminis: HNQ25_02090
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Entry
HNQ25_02090 CDS
T07154
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
psej
Pseudomonas sediminis
Pathway
psej03420
Nucleotide excision repair
psej03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
psej00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HNQ25_02090 (uvrD)
03430 Mismatch repair
HNQ25_02090 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psej03400
]
HNQ25_02090 (uvrD)
Enzymes [BR:
psej01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HNQ25_02090 (uvrD)
DNA repair and recombination proteins [BR:
psej03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HNQ25_02090 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
HNQ25_02090 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
Viral_helicase1
AAA_11
DUF3553
Motif
Other DBs
NCBI-ProteinID:
QNH01542
LinkDB
All DBs
Position
complement(441117..443300)
Genome browser
AA seq
727 aa
AA seq
DB search
MQNDLDHRLTTLNPAQHHAVTTPPGHQLVLAGAGSGKTRVLVHRIAFLIQRLDVSAHSIL
SVTFTNKAAAEMRHRIEDVLGHAPAGMWVGTFHGLAHRLLRAHWKEAKLAENFQILDSDD
QQRLIKRVIRELGLDEQRWPAKQAQWFINGQKDEGIRPQGIQASGDLFLATMRSIYEAYE
AACARTGVIDFAELLLRALDLWRDNAGLLEHYQRRFRHILVDEFQDTNAVQYAWLRFLAK
GGESLMVVGDDDQSIYGWRGAKIENIQQFDSDFADAEIIRLEQNYRSTANILNAANALIA
NNQGRLGKELRTDVGDGEPLALYAAFNEHDEARYVVETIEDALRKDGLKRSEIAILYRSN
AQSRVLEEALLREKIPYRIYGGQRFFERAEIKNAMAYLRLLDGRGNDAALERIINVPARG
IGEKTIETIREYARAHDVHMWEAIRLMLAVKALPGRASGALASFIELIEGLAEKVLAMPL
HQMTQVVVERSGLLAYHEAEKGEKGQARVENLEELVSAARAFENDEDDELTPLQAFLTHA
SLEAGDTQAAENEDSIQLMTLHSAKGLEFPLVFLVGMEEGLFPHKMSLEEPGRLEEERRL
AYVGITRAMQKLVISYAETRRLYGSETYNKVSRFVREIPAPLIQEVRLSNSVSRPVSTSS
MGGGSLFAGSAVPQTPFSLGQRVHHSLFGEGTILNFEGAGAQARVQVNFENEGSKWLMLA
YAKLEAC
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaatgacctcgaccacagactcacgaccctcaatcccgcccagcaccatgcggtc
accacgccgcctgggcatcagctggtgctggccggtgccggctcgggcaagacccgcgtg
ctggtgcatcgcatcgccttcctgatccagcgcctggatgtctcggcgcacagcatcctg
tcggtgaccttcaccaacaaggccgccgctgagatgcgtcaccgcatcgaagatgtgctg
ggccatgcccctgctggcatgtgggtcggcaccttccatggcctggcccaccgcctgctg
cgtgcgcattggaaggaggcgaagctggccgagaactttcagattctcgactccgacgat
cagcagcgcctgatcaagcgtgtgatccgtgaattgggcctggacgaacaacgctggccg
gccaagcaggcgcagtggttcatcaacgggcaaaaggacgagggcatccgcccgcaaggt
atccaggccagcggcgacctgttcctggctaccatgcgcagcatctatgaagcctacgag
gccgcctgcgcgcgcaccggtgtcatcgacttcgccgaactgctgctgcgtgccctcgac
ctctggcgcgacaacgctggcctgctggagcactaccagcgccgcttccgccatatcctg
gtcgacgagttccaggacaccaacgccgtgcagtacgcctggctgcgctttttggccaag
ggcggcgaaagtctgatggtggtgggcgatgacgatcagtcgatctatggctggcgtggc
gcgaagatcgagaacatccagcagttcgacagcgatttcgccgatgccgagatcattcgt
ctggagcagaactaccgctccaccgccaatatcctcaatgccgccaacgcgctgatcgcc
aacaaccagggccgcctcggcaaggagttgcgcaccgacgttggcgatggcgagccgctg
gccctgtatgccgccttcaacgagcacgacgaagcgcgctacgtggtcgagaccatcgag
gacgccctgcgcaaggacggcctcaagcgcagcgagatcgccattctctatcgctccaac
gcccagtcgcgcgtgctggaagaggcgctgctgcgcgagaagatcccctaccgcatctac
ggcggtcagcgcttcttcgagcgtgccgaaatcaagaacgccatggcctacctgcgcctg
ctcgacgggcgcggcaacgatgcggcgctggagcgcatcatcaacgtgccggcgcgcggc
atcggcgagaagaccatcgaaaccatccgcgagtacgcccgcgcccatgacgtgcacatg
tgggaggcgatccgcctgatgctggcggtcaaggccctgccgggccgcgcctccggcgcg
ctggccagcttcatcgagttgatcgagggcctggccgagaaggtgctggccatgcccctg
caccagatgactcaggtggtcgtcgaacgcagcggcctgctcgcctatcacgaagcggag
aagggcgagaagggccaggcccgggtggaaaatctcgaggaactggtcagcgccgcacgc
gccttcgagaacgacgaagacgacgagctgaccccgctgcaggccttcctcacccacgcc
tcgctggaggccggggacacccaggccgccgagaacgaagacagcattcaactgatgacc
ctgcacagtgccaagggcctggaattccctctggtgttcctggtgggcatggaagagggt
ctgttcccgcacaagatgagcctggaagaaccgggccgattggaagaagaacgccgcctg
gcctatgtcggcattacccgtgccatgcagaagctggtgatcagctacgccgaaacacgg
cgtctctacggtagcgagacctataacaaggtgtcgcgcttcgtccgcgaaatccccgca
ccgctgattcaggaagtgcgcctgagcaacagcgtcagccgcccggtgagcaccagctcg
atgggtggcggcagtctgttcgccggcagcgccgtaccgcaaacgcccttcagtctgggc
caacgcgtacaccacagcctgttcggcgagggcaccatcctcaatttcgagggtgctggc
gcccaggcgcgggtccaagtgaatttcgaaaacgaaggcagtaagtggctgatgctggcg
tacgccaagcttgaagcctgttag
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