KEGG   Pseudomonas sediminis: HNQ25_03280
Entry
HNQ25_03280       CDS       T07154                                 
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
  KO
K10126  two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
Organism
psej  Pseudomonas sediminis
Pathway
psej02020  Two-component system
Brite
KEGG Orthology (KO) [BR:psej00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    HNQ25_03280
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:psej02022]
    HNQ25_03280
Two-component system [BR:psej02022]
 NtrC family
  DctB-DctD (C4-dicarboxylate transport)
   HNQ25_03280
SSDB
Motif
Pfam: Sigma54_activat Response_reg Sigma54_activ_2 AAA_5 HTH_50 AAA_2 FleQ HTH_8 AAA AAA_16
Other DBs
NCBI-ProteinID: QNH01768
LinkDB
Position
complement(692476..693861)
AA seq 461 aa
MTSDSAIDSRIQVLLVDDDAHLRQALSQTLDLAGLKVISLGDAQGLAARIPAGWPGVVVS
DIRMPGIDGLQLLQQLRERDAELPVLLITGHGDVPLAVQAMRAGAYDFLEKPFANDDLLD
SVRRALELRRLVLDNRSLRMALNDRQQLSSRLVGQSPAMQRLREQIGALASIATDVLILG
ETGAGKEVVARALHDLSNRREGPFVAINAGALAESVVESELFGHEAGAFTGAQKRRIGKF
EFANGGTLFLDEIESMSMDVQVKLLRLLQERVVERLGGNQLIPLDIRVIAATKEDLRQAA
DAGRFRADLYYRLNVAPLSIPPLRERGEDALLLFQHFADGAAARHALAPRELQPGQRALL
LRHPWPGNVRELQNAAERFALGLELALDSNAPNLPPVNGGLSEQVEAFERALIAAELSRP
HGSLRSLAEALGVPRKTLHDKLRKHGLNFSGAGGSSPEDFD
NT seq 1386 nt   +upstreamnt  +downstreamnt
atgaccagcgacagcgccatcgacagccgcattcaggtactgctggtcgacgacgacgcc
catctgcgccaggcactcagccagacgctcgacctggccgggctcaaggtcatcagcctg
ggcgatgcgcagggcctggccgcgcgtattccggcaggctggccaggcgtggtggtcagc
gatatccgcatgcccggcatcgatggcctgcaactgctgcagcaattgcgcgagcgtgat
gccgagctgcccgtgctgctgatcaccggccacggtgacgtgccgctggccgtgcaagcg
atgcgcgccggcgcctacgacttcctggaaaaacctttcgccaacgatgacctgctcgac
agcgtacgccgtgcgctggagctgcgccgcctggtgctggacaaccgcagcctgcgcatg
gcgctcaatgaccgccagcaactgtccagccgcctggttggccaatcgccggccatgcag
cgcctgcgcgagcagatcggtgcacttgccagcatcgccaccgacgtactgattctcggc
gagaccggagccggcaaagaggtggtcgcacgcgctctgcacgacctgtccaaccgccgc
gaagggcccttcgtcgccatcaacgccggtgcactggcagagtcggtggtggaaagcgag
ctgttcggccatgaggctggcgctttcaccggtgcgcagaaacggcgcatcggcaagttc
gagttcgccaacggtggcaccctgttcctcgacgagatcgagagcatgagcatggatgtg
caggtcaagctgctgcgcctgctgcaggagcgtgtggtcgagcgcctcggtggtaatcag
ctgatcccgctggatatccgcgtgatcgccgcgaccaaggaagatctgcgtcaggccgcc
gatgccgggcgtttccgcgccgacctctactaccgcctcaacgtcgcaccgctgtccatc
ccaccgctgcgcgagcgcggcgaggacgccctgctgctgttccagcacttcgccgatggg
gcggccgctcgccacgccttggcgccgcgagagctacagccgggacagcgcgccttgctg
ctgcgtcatccatggccaggcaacgtgcgtgagttgcagaacgccgccgagcgcttcgcc
ctgggcctggaattggctctcgacagcaacgcgccaaacctgccgccggtcaacggcggg
ctcagcgaacaagtcgaagccttcgaacgcgccctgatcgctgccgagctgagccgcccg
cacggctcgctgcgcagcctggccgaagcgctgggcgtgccacgcaagacgctgcacgac
aaactgcgcaaacatgggttgaatttctcaggcgctggcggaagctcgccagaggacttc
gactga

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