Pseudomonas sediminis: HNQ25_03810
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Entry
HNQ25_03810 CDS
T07154
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
psej
Pseudomonas sediminis
Brite
KEGG Orthology (KO) [BR:
psej00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psej03021
]
HNQ25_03810 (rpoH)
Transcription machinery [BR:
psej03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
HNQ25_03810 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
ImpA_N
UCR_14kD
Motif
Other DBs
NCBI-ProteinID:
QNH01871
UniProt:
A0A2G5FGY1
LinkDB
All DBs
Position
796864..797718
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AA seq
284 aa
AA seq
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MSTSLQPVHALVPGANLEAYVHAVNSIPLLTPEQERELAENLFYQQDLEAARQMVLAHLR
FVVHIARSYSGYGLAQADLIQEGNVGLMKAVKRFNPEMGVRLVSFAVHWIRAEIHEFILK
NWRIVKVATTKAQRKLFFNLRSQKKRLAWLNNDEVTAVAASLGVEPHEVREMESRLTGQD
MAFDPAADADDDSAFQSPAHYLEDHRYDPARQLEDADWSDSSSSNLHEALESLDERSRDI
LYQRWLAEEKATLHDLAAKYNVSAERIRQLEKNAMNKLKGCIAA
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgtccacttccttgcaacctgttcatgctctggttccaggcgccaacctggaagcatac
gtgcatgccgtcaacagcatcccgctgctgacacccgagcaggagcgtgaactggccgaa
aatctcttttaccagcaggatctcgaggccgcccgccagatggtgttggcccacctgcgt
ttcgtggtgcatatcgcacgcagctactccggctacggtctggctcaggctgacctgatc
caggaaggcaacgtcggcctgatgaaggcggtcaagcgcttcaacccggaaatgggcgtg
cgcctggtgtctttcgctgtgcactggattcgcgcggaaatccacgagttcatcctgaag
aactggcgcatcgtcaaagtggccaccaccaaggcgcaacgtaaactgttcttcaacctg
cgcagccagaagaagcgtctggcctggctgaacaacgatgaagtgaccgccgtggccgcc
agcctgggcgtcgaaccgcatgaagtgcgcgagatggaaagtcgcctgaccggccaggac
atggccttcgaccctgcagccgatgccgacgacgacagcgccttccagtcgccagcgcat
tacctggaagaccatcgttacgacccggctcgtcagctcgaggatgccgactggagcgac
agttccagcagcaacctgcacgaagcgctggaaagcctcgacgagcgcagccgcgacatc
ctctaccagcgctggctggccgaggaaaaggcgacgctgcacgacctggctgccaagtac
aacgtatcggccgagcgtattcgtcagcttgaaaagaacgcgatgaacaagctcaaaggc
tgtatcgccgcttga
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