Pseudomonas sediminis: HNQ25_04590
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Entry
HNQ25_04590 CDS
T07154
Name
(GenBank) LPS-assembly protein LptD
KO
K04744
LPS-assembly protein
Organism
psej
Pseudomonas sediminis
Brite
KEGG Orthology (KO) [BR:
psej00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
psej02000
]
HNQ25_04590
Transporters [BR:
psej02000
]
Other transporters
Pores ion channels [TC:
1
]
HNQ25_04590
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LptD
LptD_2
LptD_N
OstA_2
Motif
Other DBs
NCBI-ProteinID:
QNH02020
LinkDB
All DBs
Position
complement(969134..971923)
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AA seq
929 aa
AA seq
DB search
MAVKYPAFRKKFPLLVTGSLLALQPAFSLQSFAAEQYDCQASPTGGWACAPKSAASALPP
RPVHSRDAVSSGGTTSEAVAKQDAAPVLVTESKGRALTSRSPDYSHLDWVPRDKLTAAQL
AEAGPYCAGAYVEPLRPGMDDTTPLDESPMFVSAKASRFEQEKQIATLAGDVVLRQSGMQ
VEADEASLHQTENRGELVGNVRLRDKGMLVVGDRAELQLDNGEARIDNAEYVMHQAHVRG
SALYAKREETAIIRLKDGTYTRCEPGDNAWHLKGNNVTLNPATGFGTATNVTLRVKDIPV
FYTPYIYFPIDDRRQSGFLPPSIGTSSDTGFSLQTPYYFNLAPNYDATLYPTYMANRGLL
MEGEFRYLTESSEGQVGGAWLNDSEDERKLQSEYEDQRWMYSWQHKQGLNSRLLAEVDYT
DISDPYYFQDLDTDLGIDKQTYVDQRGTLTYRGDSYTARLNVHAYELANITDVTPYDRLP
QITLDGKLPFNPGGLDFTYGTEYVRFDRNLRSGFFVDKDGVTGRPQDLWYDERLTGLSRA
DGERLHLEPGVALPLNWSWGFVKPQVKYLQTNYDISLDQQGKDTLLAEQNYKGTQSRGVG
LFSVDSGLYFDRNTQLFGKDFRQTLEPRAFYLYVPEEDQTDIPVFDTGEPTFSYASLWRE
NRFSGKDRIGDENKLSLGVTSRWIEPNGFERQRFSIGQAFYFEDRKVQLPGIDYRTRQEA
TSDVSPYALEYLYRFNRDWRFSSTFNWDPDQHATRSGSAMFHYQPEANPGKIVNFGYRYR
NDTVRYDRDSGTWTTNPDYGNETLADGSANPNYIKNYYKIDQHDFSVIWPLAPQWSLISR
WQYDYGRNRTLEAFGGFEYDSCCWKLRLINRYWIDYDEVSLDPSRNDEPDRGIFLQIVLK
GLGGVVGNKVETFLDQGIQGYREREDQAF
NT seq
2790 nt
NT seq
+upstream
nt +downstream
nt
atggcagtaaaataccccgcgttccgcaagaaattcccgctgctggtcaccggcagcctc
ctggccttacagcccgcgttcagcctacagtcctttgccgccgagcaatacgattgccag
gcatcgcccacgggcggctgggcctgcgcgccgaaatcggcggccagcgccctgcctccg
cgcccagtgcacagccgcgatgctgtcagctcgggtggcaccaccagcgaggcggtagcc
aagcaggatgctgccccggtgctggtcaccgagagcaagggccgtgccctcacctcgcgc
agccccgattacagtcacttggactgggtcccgcgcgataagttgactgccgcgcagttg
gccgaggctggtccttactgtgcaggcgcctatgtcgagccactgcgtccaggcatggat
gacaccacgccgctggacgagtcgccgatgttcgtttccgccaaagcctcgcgcttcgag
caggaaaagcagatcgctaccctcgccggtgatgtcgtcctgcgccaatccggcatgcaa
gtcgaggccgacgaagccagcctgcaccagacggaaaaccgtggcgaactggtcggcaac
gtacgcctgcgggacaagggcatgctggtggtcggcgaccgtgccgaactgcagctggat
aatggtgaagcccgtatcgacaatgccgaatacgtgatgcaccaggcccacgtgcgtggt
agcgcgctctacgccaagcgcgaagagaccgcgatcatccgcctcaaggatggcacctat
acccgttgcgagccgggcgacaacgcctggcacctgaagggcaacaacgtcaccttgaac
ccggcgactggcttcggcaccgccaccaacgtgacgctgcgggtcaaggacattccggtg
ttctacaccccgtacatctacttcccgatcgacgaccgtcgccagtccggcttcctgccg
ccgagcattggcacctccagcgacaccggtttttcgctgcaaacgccgtattacttcaac
ctggcgccgaactacgacgccacgctgtacccgacctatatggccaatcgtggcctgcta
atggaaggtgaattccgctacctgaccgaaagcagcgaaggccaggtcggcggcgcatgg
ctgaacgacagcgaagacgagcgcaagctgcagtccgagtacgaagaccagcgctggatg
tacagctggcagcacaagcagggcctgaactcgcgcctgctcgccgaagtcgactacacc
gatatcagcgacccgtactacttccaggatctcgataccgatctgggcatcgacaagcaa
acctacgtagaccagcgcggcacgctgacctatcgcggtgacagctataccgcacgcctg
aacgtgcatgcatacgaactggctaacatcactgatgtgacgccgtatgatcgtctgccg
cagatcaccctggatggcaaactgccgttcaatccgggtggcctggacttcacctatggc
accgaatacgtgcgctttgatcgcaacctgcgctctggtttcttcgttgataaagatggc
gtaaccggccgcccgcaggacctctggtatgacgaacgcttgaccggcctttcgagggcc
gatggtgagcgactgcatctcgaacctggtgttgccctgccgctaaactggagctggggt
tttgtcaaacctcaggtcaagtacctgcagaccaactacgacatcagcctggatcagcaa
ggcaaagatacgctgctggctgagcagaattacaagggcacacagagccgtggcgtcggc
ctgttcagcgttgacagcggcctgtatttcgaccgcaacacccagctgttcggcaaagat
ttccgccagaccctggaaccgcgtgcgttctacctctatgtgccggaagaagaccagacc
gacatcccggtgttcgatacgggcgagccgaccttcagctacgcctcgctgtggcgtgaa
aaccgcttcagtggcaaggatcgtatcggtgatgagaacaagctgtcgctgggcgtgacc
agccgctggatcgagccgaacggcttcgagcgccagcgcttcagcatcggccaggcgttc
tacttcgaagaccgcaaggttcaactgccgggtattgactaccgtacccgccaggaagcc
acctcggacgtgtcgccttatgcgctggagtacctgtatcgcttcaaccgcgactggcgc
ttctcgtccaccttcaactgggatccggaccagcacgccacccgctcgggcagcgcgatg
ttccactaccagccagaagccaacccgggcaagatcgtcaacttcggctatcgctatcgt
aacgacaccgtgcgctatgaccgtgacagcggtacttggaccaccaacccggactacggt
aacgagacccttgccgacggctcggcgaaccccaactacatcaagaactactacaagatc
gaccagcatgacttctccgtcatctggccgctggctccgcagtggagcctgatctcgcgc
tggcagtacgactatggccgcaaccgtactctcgaagccttcggtggtttcgaatacgac
agctgctgctggaagctgcgcctgatcaaccgctactggatcgattacgacgaagtcagc
ctcgacccatcgcgcaacgacgagccggaccgcggcatcttcctgcagatcgtcctcaag
ggcctcggcggcgttgttggcaacaaggtggaaactttcctcgaccaaggcattcaaggt
taccgtgaacgtgaagaccaagctttctga
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