Pseudomonas sediminis: HNQ25_05630
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Entry
HNQ25_05630 CDS
T07154
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
psej
Pseudomonas sediminis
Pathway
psej00550
Peptidoglycan biosynthesis
psej01100
Metabolic pathways
psej01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
psej00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
HNQ25_05630 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
HNQ25_05630 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
psej01011
]
HNQ25_05630 (mrdA)
Enzymes [BR:
psej01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
HNQ25_05630 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
psej01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
HNQ25_05630 (mrdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
QNH02211
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All DBs
Position
1174494..1176386
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AA seq
630 aa
AA seq
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MPQPIRLKDHEKDARLVKRRVLVGGVVIILLTCVLVMRMYYLQVIQYEHHSTLAENNRIH
VQPLPPTRGLIYDRNGVIIADNRPSFSLTVTRERAGDWLSVLDTVVEVLELTEDERALFE
RRVRQGRRPFEPVPILFELSEEQIARIAVNQFRLPGVEVAAQLVRHYPQQEHFAHSVGYV
GRINEQELKRLDPTDYAGTHHIGKTGIERFYEDELHGEVGYEEVETNARGRVLRVLNRVD
PKPGKDIVLSLDVHLQEAAENALGGRRGAVVAIDPNNGEVLAMVSQPSFDPNPFVTGISF
KAYGELRDSIDQPLYNRVLRGLYPPGSTIKPMVAVAGLDAGVVTPTSRVFDPGFYQLPNH
SHKYRNWNRTGDGWVDLNLAIARSNDTYFYDLAHKMGVDRMHDYMSRFGLGQRVSLDMFE
ETAGLMPSRDWKRARYRQPWYPGETLILGIGQGYMQTTPLQLAQATALMATRGKWIRPHL
AKSVDGRLPSDPNPIADIVLRDPKFWDYGIRGMEEVLHGPRGTARKVGDSSVYRIAGKSG
TAQVVAIKQGEKYDRNKVQERHRDHALFIGFAPANNPQIAVAVMVENGESGSGVAAPVVK
QVMDAWLLDKETGQLKAKFALPKPAEVSQR
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atgccgcagccgattcgcctcaaggatcacgaaaaggacgctcgcctggtcaagcgccgg
gtgctcgtcggcggcgtggtgatcatcctgctgacctgcgtgctggtcatgcgcatgtac
tacctgcaggtgattcagtacgagcatcacagcaccctggcagagaacaaccgcatccac
gtgcagccgctgccgccgacccgcgggctgatttacgatcgcaacggcgtgatcatcgcc
gacaaccgtcccagcttcagcctgaccgtgacccgtgagcgtgccggtgactggctcagc
gtgctcgacaccgtggtcgaggtgctggaacttaccgaggacgagcgtgcgctgttcgaa
cgccgcgtgcgccaggggcggcgtccgttcgaaccggtaccgatcctgttcgagctgagc
gaggagcagattgcccgcatcgcggtcaaccagttccgtctgccgggggtcgaggtggct
gcgcagctggtgcggcattacccgcagcaggagcacttcgctcattcggtcggctatgtc
gggcgcatcaacgagcaggagctcaagcgcctcgatcctaccgactatgccggcacgcac
catatcggcaagaccggtatcgagcgcttctacgaggacgagctgcacggcgaggtcggc
tatgaggaggtcgagaccaatgcccgtggccgcgtattgcgcgtactcaaccgcgtcgat
ccgaaaccgggcaaggacattgtgctcagcctcgacgtgcacctgcaggaggcggctgaa
aacgccctgggcggtcgacgtggcgccgtggtagccatcgatccgaataatggcgaagtc
ttggcgatggtcagccagcccagcttcgaccccaaccccttcgtcaccggtatcagcttc
aaggcctacggtgagctgcgcgactccatcgatcagccgctgtataaccgggtgctgcgc
ggcctttacccgccgggttcgacgatcaaaccgatggttgctgtggccggtctcgatgcc
ggtgtggtcacgcctacttcgcgggtgttcgacccaggcttctatcagttgcccaaccac
agccacaaataccgtaactggaaccgtactggtgacggttgggtcgatctcaatctggcc
atcgctcgctccaacgacacctatttctacgatctggcgcacaagatgggcgtcgatcgc
atgcacgattacatgagccgcttcggccttgggcagcgtgtttccctggatatgttcgag
gagaccgccggcctgatgccttcgcgcgactggaaacgggcacgttatcgtcaaccctgg
tatccgggcgagacgctgattctcggtatcggtcagggctacatgcagaccacgccgctg
caattggcgcaggccaccgcattgatggccacgcgcggcaagtggattcgcccacacctg
gccaagagcgtcgacggccgcctgccgtcagacccgaatccgattgcggatatcgtcctg
cgtgatcccaagttctgggattacggcattcgcggcatggaagaggtgttgcacggccct
cgcggtaccgcgcgcaaggttggtgacagttcggtctatcgtatcgccggcaagagcggt
acggcgcaggtggtggcgatcaagcagggtgagaagtacgaccgtaacaaggtacaggag
cgccaccgcgaccacgcgctgttcatcggttttgcaccggcgaacaacccgcagattgcc
gtcgcggtcatggtggagaacggtgagtccggctccggtgttgccgcgcccgtggtcaag
caggtgatggatgcctggctgctggataaggaaaccggccagctcaaggccaagttcgcg
ttgcccaagcctgccgaggtcagtcagcgatga
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