Pseudomonas sediminis: HNQ25_05680
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Entry
HNQ25_05680 CDS
T07154
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
psej
Pseudomonas sediminis
Pathway
psej03030
DNA replication
psej03430
Mismatch repair
psej03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psej00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HNQ25_05680
03430 Mismatch repair
HNQ25_05680
03440 Homologous recombination
HNQ25_05680
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psej03032
]
HNQ25_05680
03400 DNA repair and recombination proteins [BR:
psej03400
]
HNQ25_05680
Enzymes [BR:
psej01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HNQ25_05680
DNA replication proteins [BR:
psej03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HNQ25_05680
DNA repair and recombination proteins [BR:
psej03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HNQ25_05680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delt_C
DNA_pol3_delta_C
Motif
Other DBs
NCBI-ProteinID:
QNH02220
UniProt:
A0A7G7RHG8
LinkDB
All DBs
Position
complement(1184932..1185966)
Genome browser
AA seq
344 aa
AA seq
DB search
MKLAPAQLGKHLQGTLAPVYAISGDEPLLCQETADAIRNACRQQGFGERQVFNAEANFDW
GNLLQAGASLSLFAEKRLLELRLPSGKPGDKGTAALLEYLARPPEDTVLLLSLPKLDGST
QKSKWAKALIDGQVSQFIQIWPVDANQLPQWIRQRLAQAGLSASADAVDMIAARVEGNLL
AAAQEVEKLKLLADGNQVDAETVQAAVADSARFDVFGLIDCALGGDAAHALRVLEGLRGE
GVETPVILWALAREIRLLAGIAHQQSQGIPLDKAFSSARPPVWDKRRPLVSKALQRHSSK
RWGQLLQQAQLIDAQIKGQAPGDPWSELAMLTLQLSGQRLRLAP
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgaagcttgcccccgcgcaactcggcaaacacctgcaaggcacgctcgcacctgtctat
gcgatcagcggcgacgagccattgctgtgccaggaaaccgctgacgccatccgcaatgcc
tgtcgccagcaggggtttggcgaacgccaggtgttcaatgccgaagccaacttcgactgg
ggcaacctgctgcaggcgggtgccagcctctcgctgttcgccgaaaagcgcctgctggaa
ctgcgcctgccttccggcaagcctggcgacaagggcaccgccgcgctgctcgagtacctg
gcccgcccgcccgaggacaccgtcctgctgctgagcctgcccaagctcgatggcagcacg
caaaaatccaaatgggccaaagcgctgatcgacggccaggtgagccagttcatccagatc
tggccggtggatgccaatcagctgccgcagtggattcgccagcgcctcgcgcaggctggc
ctgagcgccagcgccgatgcggtggacatgatcgccgctcgggtggaaggcaacctgctg
gccgccgctcaggaagtggaaaagctcaagctgctcgccgacggcaaccaagtcgatgcc
gaaacagtccaggccgccgtggccgacagtgcgcgttttgacgtcttcggcctgatcgac
tgcgccctcggtggcgatgccgcacacgccttgcgcgtcctcgaagggctgcgtggcgaa
ggtgtggaaaccccggtgattctctgggcgctggcacgcgagattcgtctactggccggt
atcgcccaccagcagagccagggcatcccattggacaaagccttctccagcgcccgcccg
ccagtctgggataaacgtcgccccctggtttccaaagccttgcagcgtcacagcagcaaa
cgctggggccagttgctgcagcaggcgcagttgatcgacgcacagatcaagggccaggcg
cccggtgatccgtggagcgagctggccatgctgaccctgcaactgtccggacaacggctg
cgtctcgctccgtag
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