Pseudomonas sediminis: HNQ25_05725
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Entry
HNQ25_05725 CDS
T07154
Symbol
miaB
Name
(GenBank) tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
psej
Pseudomonas sediminis
Brite
KEGG Orthology (KO) [BR:
psej00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
psej03016
]
HNQ25_05725 (miaB)
Enzymes [BR:
psej01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
HNQ25_05725 (miaB)
Transfer RNA biogenesis [BR:
psej03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
HNQ25_05725 (miaB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
B12-binding
TRAM_2
Motif
Other DBs
NCBI-ProteinID:
QNH02229
LinkDB
All DBs
Position
complement(1194828..1196171)
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AA seq
447 aa
AA seq
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MTKKLYIETHGCQMNEYDSSRMVDLLGEHQALEVTEKPEEADVILLNTCSIREKAQDKVF
SQLGRWRELKQANPDLVIGVGGCVASQEGAAIRDRAPYVDVVFGPQTLHRLPEMIDAARV
TKTAQVDISFPEIEKFDRLPEPRVDGPSAFVSVMEGCSKYCTFCVVPYTRGEEVSRPLVD
VLMEITSLTEKGVKEITLLGQNVNGYRGEAPDGHIADFAELLHAVAALDGVERIRYTTSH
PLEFSDAIIQAHAEIPQLVKYLHLPVQSGSDRILAAMKRNHTALEYKSRIRKLRAAVPDI
LISSDFIVGFPGETEKDFEQTMKLIEDVGFDFSFSFIYSSRPGTPAADLVDDTPDEVKKQ
RLALLQHRINQNGFENSRRMVGTVQRILVSDYSKKDPGMLQGRTEQNRIVNFRCDNPRLI
GQFVDVHIDDALPHSLRGTLLDAETLH
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgaccaagaagctctatatcgaaacccacggttgccagatgaacgagtacgacagctcg
cgcatggtcgacctgctgggcgagcatcaggccctggaggtcacggaaaaacccgaagaa
gccgacgtgatcctgctcaatacctgctcgatccgtgagaaggcgcaggacaaggtgttc
tcccagctcggccgttggcgcgagctgaagcaggccaacccggacctggtgatcggcgtc
ggtggctgcgtggccagccaggaaggcgcggcgatccgcgaccgcgcgccctatgtcgac
gtggtattcggcccgcagactctgcaccgcctgccggagatgatcgacgccgcgcgcgtg
accaagaccgcccaggtggacatcagcttccccgagatcgagaaattcgaccgcctgccc
gagccacgcgtcgacggccccagcgcctttgtctcggtgatggaaggctgcagcaagtac
tgcaccttctgcgtggtgccctacacccgcggcgaggaagtcagccgcccgctggtcgac
gtgttgatggaaatcacctctctgaccgagaagggcgtgaaggaaatcaccctgctcggg
cagaacgtcaacggctatcgcggggaagccccggacggccatatcgccgacttcgccgaa
ctgctgcatgccgtggctgccctcgatggcgtcgagcgcatccgctacaccaccagccac
ccgctggagttctccgacgcgatcatccaggcccacgccgaaatcccgcagttggtcaaa
tacctgcacctgccggtgcagtccggctccgaccgtatcctcgcggcgatgaagcgcaac
cacaccgcgctggaatacaagtcgcgcatccgcaaactgcgtgcggcggtaccggacatc
ctgatcagctcggacttcatcgtcggcttccccggcgagaccgagaaggatttcgagcag
accatgaagctgatcgaggacgtcggcttcgacttctccttctccttcatctacagctcg
cgacccggcaccccggccgccgatctggtcgacgacaccccggacgaggtgaagaaacag
cgcctggccctgctgcagcaccgcatcaaccagaacggcttcgagaacagccggcgcatg
gtcggcacggtgcaacgcatcctggtcagcgattactcgaagaaggacccgggcatgctc
cagggccgcaccgagcagaaccgcatcgtcaatttccgctgcgataacccgcgcctgatc
ggccagttcgtcgacgtgcacatcgacgacgccctgccgcactcgctgcgcggcaccctg
ctggatgccgagaccctccactaa
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