Pseudomonas sediminis: HNQ25_06280
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Entry
HNQ25_06280 CDS
T07154
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
psej
Pseudomonas sediminis
Pathway
psej03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psej00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HNQ25_06280 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psej03019
]
HNQ25_06280 (groL)
03110 Chaperones and folding catalysts [BR:
psej03110
]
HNQ25_06280 (groL)
03029 Mitochondrial biogenesis [BR:
psej03029
]
HNQ25_06280 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
psej04147
]
HNQ25_06280 (groL)
Enzymes [BR:
psej01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
HNQ25_06280 (groL)
Messenger RNA biogenesis [BR:
psej03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
HNQ25_06280 (groL)
Chaperones and folding catalysts [BR:
psej03110
]
Heat shock proteins
HSP60 / Chaperonin
HNQ25_06280 (groL)
Mitochondrial biogenesis [BR:
psej03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
HNQ25_06280 (groL)
Exosome [BR:
psej04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
HNQ25_06280 (groL)
Exosomal proteins of other body fluids (saliva and urine)
HNQ25_06280 (groL)
Exosomal proteins of breast cancer cells
HNQ25_06280 (groL)
Exosomal proteins of colorectal cancer cells
HNQ25_06280 (groL)
Exosomal proteins of bladder cancer cells
HNQ25_06280 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
QNH02335
LinkDB
All DBs
Position
complement(1307160..1308806)
Genome browser
AA seq
548 aa
AA seq
DB search
MAAKEVKFGDSARKKMLVGVNVLADAVKATLGPKGRNVVLAKSFGAPTITKDGVSVAKEI
ELKDAFENMGAQLVKDVASKANDAAGDGTTTATVLAQAIVNEGLKSVAAGMNPMDLKRGI
DKATTAIVAQLKDLAKPCADSKAIAQVGTISANSDSSIGDIIAEAMDKVGKEGVITVEEG
SGLENELSVVEGMQFDRGYLSPYFINKPDTMVAELEGPLLLLVDKKISNIRELLPVLEAV
AKAGRPLLIVAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDIAILTGGTV
ISEEVGLSLESATLEHLGNAKRVVLNKDNTTIIDGAGAQVDIEARVAQIRKQVEETSSDY
DKEKLQERLAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVPGGGVALV
RALQAIDGLKGDNEDQNVGIALLRRAVEAPLRQIVANAGGEPSVVVDKVKQGSGNFGFNA
ATDTYGDMIEMGILDPAKVTRSALQAAASIGGLMITTEAMVAEAADDKAPAMPDMGGMGG
MGGMGGMM
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggctgctaaagaagtcaagtttggcgattccgcccgcaagaaaatgctcgttggcgtc
aacgtactggccgacgccgtcaaagccaccctcggcccgaaaggccgtaacgtggttctg
gccaaatccttcggcgccccgaccatcaccaaagacggtgtgtcggttgccaaggaaatc
gaactgaaagacgccttcgaaaacatgggcgcccagctggtcaaggacgtagcgtccaag
gccaacgacgcagccggtgacggcaccaccaccgctaccgttctggctcaagccatcgtc
aacgaaggcctgaagtccgtcgctgccggcatgaacccgatggacctgaagcgcggcatc
gacaaggcgaccaccgccatcgttgctcagctgaaagacctggccaagccgtgcgccgac
tccaaggccatcgcccaggtcggcaccatctccgccaactccgacagctccatcggtgac
atcatcgccgaagccatggacaaggtcggtaaagaaggcgtcatcaccgttgaagaaggc
tcgggcctggaaaacgaactgtccgtcgtagaaggcatgcagttcgaccgcggctacctg
tctccgtacttcatcaacaagccggacaccatggttgccgagctggaaggcccgctgctg
ctgctggtcgacaagaagatctccaacatccgcgaactgctgccggttctggaagccgtt
gccaaggctggccgtccgctgctgatcgtggctgaagacgtcgaaggcgaagcgctggct
accctggtcgtcaacaacatgcgtggcatcgtcaaagtcgctgccgtcaaggctccgggc
ttcggcgaccgccgcaaggccatgctgcaggacatcgccatcctgaccggcggtaccgtg
atctccgaagaagttggcctgtccctggaaagcgccactctggagcacctgggtaacgcc
aagcgcgtcgtgctgaacaaggacaacaccaccatcatcgatggtgctggtgcccaggtc
gacatcgaagcccgcgttgcacagatccgcaagcaggtcgaagaaacctcttccgactac
gacaaagagaaactgcaagagcgtctggccaagctggctggcggtgttgccgtgatcaag
gttggcgctgccaccgaagtcgagatgaaagagaagaaagcccgcgttgaagacgccctg
cacgctacccgcgcagccgtcgaagaaggcgtggtacctggcggcggtgtagccctggta
cgtgccctgcaggccatcgacggcctgaaaggcgacaacgaagaccagaacgtcggtatc
gctctgctgcgtcgcgctgtcgaagcgccgctgcgtcagatcgttgccaacgccggcggc
gagccgagcgtagtggtcgacaaggtcaagcagggttcgggcaacttcggcttcaacgcc
gcgaccgacacctacggcgacatgatcgagatgggtattctcgacccggccaaggtcacc
cgctcggcgctgcaagctgctgcttccatcggcggcctgatgatcaccaccgaggccatg
gttgccgaagcggctgacgacaaggctccggccatgcctgatatgggtggcatgggcggt
atgggtggcatgggcggcatgatgtaa
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