Pseudomonas sediminis: HNQ25_06680
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Entry
HNQ25_06680 CDS
T07154
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
psej
Pseudomonas sediminis
Brite
KEGG Orthology (KO) [BR:
psej00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
psej03016
]
HNQ25_06680 (truB)
Enzymes [BR:
psej01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
HNQ25_06680 (truB)
Transfer RNA biogenesis [BR:
psej03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HNQ25_06680 (truB)
Prokaryotic type
HNQ25_06680 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
PUA_3
Motif
Other DBs
NCBI-ProteinID:
QNH02408
LinkDB
All DBs
Position
1394554..1395474
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AA seq
306 aa
AA seq
DB search
MAQVKRIRRKVDGIILLDKPHGFTSNAALQKVRWLLNAEKAGHTGSLDPLATGVLPLCFG
EATKFSQYLLDADKGYETVAQLGVTTTTGDAEGDVIERRPVTVGRAEIEALLPRFRGEIK
QIPPMYSALKKDGQPLYKLARAGEVVEREARSVTIARLELLACEGEQARLAVDCSKGTYI
RTLVEDLGQLLGCGAHVAELRRTKAGPFDLTRTVTLEELEAAHAEGGNEALDRFLLPADS
GLQDWPLLQFSEHSAFYWLQGQPVRAPEAPKFGMVRVQDHNGRFIGIGEVSDDGRVAPRR
LIYTGA
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
gtggcgcaggtcaaacgtattcgccgcaaggtcgacggcatcatcctgctcgacaagccg
cacggtttcacgtccaacgccgcgctacagaaagtgcgttggctgctcaatgccgagaag
gccggtcacaccggcagcctcgatccactggccaccggtgtgttgccgctgtgtttcggt
gaagcgaccaagttttcccagtatctgctcgacgctgacaagggctacgagaccgtcgct
cagttgggcgttaccaccacgactggtgatgccgaaggtgatgttatcgaacggcgcccg
gtgaccgtcggtcgcgccgaaatcgaggcactactgccgcgttttcgtggtgaaatcaaa
cagataccgccgatgtactcggcgttgaagaaggacggtcagccactctacaagctggcc
cgtgcgggtgaagtagtggagcgcgaagcgcgttctgttactattgcgcgtctggaactg
ctggcctgcgaaggcgagcaggcccgtctggcggttgattgcagtaaaggtacctatatt
cgtacgttggtcgaggatctcggccaattgctgggctgcggtgcgcatgtcgccgagttg
cgtcgtaccaaggccgggccgttcgatttgacgcgcaccgtgacgctggaagaactggaa
gctgcacacgccgaaggtggcaacgaggcgctggatcgcttcctgctaccggccgatagc
ggtctgcaggactggcctttgctgcagttctccgagcacagcgcgttctactggttgcaa
gggcagccggtgcgagcgccggaagcaccgaagttcggtatggtgcgggtgcaagatcat
aatggtcgcttcatcggcatcggtgaagtgagtgacgatgggcgtgttgccccgcgtcga
ttgatttataccggtgcgtag
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