KEGG   Pseudomonas sediminis: HNQ25_07170
Entry
HNQ25_07170       CDS       T07154                                 
Symbol
sbcD
Name
(GenBank) exonuclease subunit SbcD
  KO
K03547  DNA repair protein SbcD/Mre11
Organism
psej  Pseudomonas sediminis
Brite
KEGG Orthology (KO) [BR:psej00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:psej03400]
    HNQ25_07170 (sbcD)
DNA repair and recombination proteins [BR:psej03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     HNQ25_07170 (sbcD)
    Archaeal homologous recombinant proteins
     HNQ25_07170 (sbcD)
SSDB
Motif
Pfam: SbcD_C Metallophos Metallophos_2
Other DBs
NCBI-ProteinID: QNH02495
UniProt: A0A7G7RI93
LinkDB
Position
1501327..1502547
AA seq 406 aa
MSLRILHTSDWHLGQHFMGKTRQAEHQAFCAWLLEQVRVHDVDVLLIAGDVFDTGAPPSY
AREQYYRLVVELRDAGCALVVLGGNHDSPAMLGESRSLLGQLGTLVVPSVGVDLAEQVLV
LNDRTGQPGAILCAIPFIRPRDVLASQAGQSAQDKQQSLQQAIAEHYRALYELAASTRDE
LGQALPIIATGHLTTVGASASESVREIYVGSLEAFPTSAFPPADYIALGHIHRPQKVGGL
EHIRYSGSPIALSFDEARQQKEVLLLTFEGATLQSITPLPVPVFQPMASLRGSLKELAGS
ITDAAAQGTPERPVWLEVQVSTDDYLSDLQNRINALCEGHPVEVLRIRRERGNAVASLAS
EARETLDELSVEDVFARRLQQETLEEEDAQRLQGLYRQVLEALSKA
NT seq 1221 nt   +upstreamnt  +downstreamnt
atgagcttgcgcatcctgcacacctccgactggcacctcggccagcatttcatgggcaag
actcggcaggccgagcaccaggccttctgcgcctggctgctggagcaggtgcgcgtgcac
gacgtggacgtgttgttgatcgccggtgatgtgttcgacaccggcgcaccgcccagttat
gcccgcgagcagtactaccgactggtggttgagttgcgcgacgccggctgcgccctggtg
gtactcggtggcaaccacgactcgccggccatgctcggtgaaagccgtagcctgctgggc
caactgggcaccctggtggtgccgagcgtgggcgtcgacctggccgaacaggtactggtg
ctcaacgatcgcactggccagccgggcgccattctctgcgccattcccttcatccgcccg
cgcgacgtgctggccagccaggcggggcagagcgcacaggacaaacaacagtcgctgcag
caagccatcgccgagcattaccgggcactgtacgagctggcggcgagcacgcgtgacgag
ctgggccaggcgttgccgatcatcgctaccggtcacctcaccacggttggcgccagcgcc
agtgagtctgtgcgcgagatctacgtcggcagcctggaggccttccccaccagcgccttc
ccgccggcggactacatcgcccttggccatatccaccgcccgcagaaggtcggcggcctg
gagcacatccgctacagcggctcgccgattgccctgtccttcgacgaggcgcgccagcag
aaggaagtcctgctgctgacgttcgaaggcgccaccctgcagtcgatcacgccactgccc
gtgccggtattccagcccatggccagcctgcgcggctcgctcaaggagttggcaggctcc
atcaccgacgcagctgcacaaggcacacccgagcggcctgtctggttggaagtgcaagtg
agcaccgacgactacttgagcgacctgcaaaaccgcatcaatgccctgtgcgaagggcat
cccgtggaggtgctgcgtatccgccgcgagcgcggcaacgccgtggctagcctggccagc
gaagcacgggaaacgttggacgagctgagcgtggaggacgtcttcgcccgccgcctgcag
caagagacattggaagaagaggatgcccagcgcctgcagggtttgtatcggcaggtgctg
gaggcgctgtccaaggcttag

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