Pseudomonas sediminis: HNQ25_07170
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Entry
HNQ25_07170 CDS
T07154
Symbol
sbcD
Name
(GenBank) exonuclease subunit SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
psej
Pseudomonas sediminis
Brite
KEGG Orthology (KO) [BR:
psej00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psej03400
]
HNQ25_07170 (sbcD)
DNA repair and recombination proteins [BR:
psej03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HNQ25_07170 (sbcD)
Archaeal homologous recombinant proteins
HNQ25_07170 (sbcD)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
QNH02495
UniProt:
A0A7G7RI93
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Position
1501327..1502547
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AA seq
406 aa
AA seq
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MSLRILHTSDWHLGQHFMGKTRQAEHQAFCAWLLEQVRVHDVDVLLIAGDVFDTGAPPSY
AREQYYRLVVELRDAGCALVVLGGNHDSPAMLGESRSLLGQLGTLVVPSVGVDLAEQVLV
LNDRTGQPGAILCAIPFIRPRDVLASQAGQSAQDKQQSLQQAIAEHYRALYELAASTRDE
LGQALPIIATGHLTTVGASASESVREIYVGSLEAFPTSAFPPADYIALGHIHRPQKVGGL
EHIRYSGSPIALSFDEARQQKEVLLLTFEGATLQSITPLPVPVFQPMASLRGSLKELAGS
ITDAAAQGTPERPVWLEVQVSTDDYLSDLQNRINALCEGHPVEVLRIRRERGNAVASLAS
EARETLDELSVEDVFARRLQQETLEEEDAQRLQGLYRQVLEALSKA
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgagcttgcgcatcctgcacacctccgactggcacctcggccagcatttcatgggcaag
actcggcaggccgagcaccaggccttctgcgcctggctgctggagcaggtgcgcgtgcac
gacgtggacgtgttgttgatcgccggtgatgtgttcgacaccggcgcaccgcccagttat
gcccgcgagcagtactaccgactggtggttgagttgcgcgacgccggctgcgccctggtg
gtactcggtggcaaccacgactcgccggccatgctcggtgaaagccgtagcctgctgggc
caactgggcaccctggtggtgccgagcgtgggcgtcgacctggccgaacaggtactggtg
ctcaacgatcgcactggccagccgggcgccattctctgcgccattcccttcatccgcccg
cgcgacgtgctggccagccaggcggggcagagcgcacaggacaaacaacagtcgctgcag
caagccatcgccgagcattaccgggcactgtacgagctggcggcgagcacgcgtgacgag
ctgggccaggcgttgccgatcatcgctaccggtcacctcaccacggttggcgccagcgcc
agtgagtctgtgcgcgagatctacgtcggcagcctggaggccttccccaccagcgccttc
ccgccggcggactacatcgcccttggccatatccaccgcccgcagaaggtcggcggcctg
gagcacatccgctacagcggctcgccgattgccctgtccttcgacgaggcgcgccagcag
aaggaagtcctgctgctgacgttcgaaggcgccaccctgcagtcgatcacgccactgccc
gtgccggtattccagcccatggccagcctgcgcggctcgctcaaggagttggcaggctcc
atcaccgacgcagctgcacaaggcacacccgagcggcctgtctggttggaagtgcaagtg
agcaccgacgactacttgagcgacctgcaaaaccgcatcaatgccctgtgcgaagggcat
cccgtggaggtgctgcgtatccgccgcgagcgcggcaacgccgtggctagcctggccagc
gaagcacgggaaacgttggacgagctgagcgtggaggacgtcttcgcccgccgcctgcag
caagagacattggaagaagaggatgcccagcgcctgcagggtttgtatcggcaggtgctg
gaggcgctgtccaaggcttag
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