Pseudomonas sediminis: HNQ25_07250
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Entry
HNQ25_07250 CDS
T07154
Name
(GenBank) AAA family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
psej
Pseudomonas sediminis
Brite
KEGG Orthology (KO) [BR:
psej00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psej03400
]
HNQ25_07250
DNA repair and recombination proteins [BR:
psej03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HNQ25_07250
Archaeal homologous recombinant proteins
HNQ25_07250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
ABC_tran
AAA_15
cobW
nSTAND3
AAA_21
RsgA_GTPase
AAA_22
NTPase_1
AAA
Motif
Other DBs
NCBI-ProteinID:
QNH02507
LinkDB
All DBs
Position
1518326..1521760
Genome browser
AA seq
1144 aa
AA seq
DB search
MKILSLRLKNLNSLKGEWKIDFAAEPFAGSGLFAITGPTGAGKTTLLDAICLALYHRTPR
MSTLSASGNELMTRHTADCLAEVEFEVKGQGYRAFWSQRRARDKVDGALQAPKVELARIA
DGEILTDKIREKESLTAELTGLDFERFTKSMLLAQGGFAAFLEANANQRAELLEELTGTE
VYGQISQQVYERTKAAEQALGLLKSRAQGMELLDEAQRAELQAEAERLAQEQAPLQAEQQ
TLLAGQRWREALQRAEQQTGEAARGLEQAQQRQAAAADDLQRLAASEPAARLQPLHQAWQ
QAQHDSQQAERGLFALREQMQMCAERERQALWQASHHAGHWREQRHIALTQAQHQHADVQ
AWLSERSSHARLGELLSGWDERFTQRAKAEQALQTAQTRLSDSAAQLTTLQRQRDEQGVR
LTTLQQQVQQARDVEGQQQGALQALLGDAGEAGLRQDWQRLQTRSRVLDRLQQLAQSREA
LAVQLAELPPRLAELQRRQAHKNTEINALRERYKALKQQVADKEKLLEQEKRIQDLEAYR
ARLQPGDACPLCGSHEHPAISQYQALNVSATEQALMQCRSELAELESQGANLRDELTRLA
AQIEQVQQQQAQAEAQLLPLDQQWQQQLSEHDIRLQDVAELTGVQQQHEQELAALQARLE
AAQAQQTELQRLRELRESAEREQAEAERQQAILSRDLDNTQVRLTEQQAHLSALQTELAQ
QAQELLASLQGFASELPADGAGWLTQQKAVWHAWQQTQAREQQLLELTREAQRQLDEAQT
QAEHWQQRWQDAGAPGLATPAAVADPQQALRESAERLAATLRERDGLAGSEQAQEALLAR
EQQRLQSCQQAWQQALLSSPFADQTAFEAALLSEDERLRLVQLKADLERAHTQAATLLAA
AQAEVQRLTAEAQTALSLELLAEQLQALQERLRALSERQGELRAQLQADEARRSSQQALF
AEISAQESEQRLWQQLNGLIGSADGAKFRKFAQGLTLDHLIHLANRQLTRLHGRYQLARK
GSGELELEVRDTWQADVARDCRTLSGGESFLVSLALALALSDLVSHKTSIDSLFLDEGFG
TLDGETLEVALDALDNLNASGKTIGVISHVEAMKERIPLQLRVHKGVGLGYSRLDARFAV
KEGA
NT seq
3435 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattctcagcctgcgcctcaagaacctcaattctctcaagggtgaatggaagatc
gacttcgctgccgagcctttcgccggtagcggtctgttcgccatcaccgggccgaccggg
gcgggcaagaccaccttgctcgacgccatttgcctggcgctgtaccaccgcacgccgcgc
atgagcacgctgtcggccagcggtaacgagctgatgactcggcacaccgctgattgcctg
gccgaggtcgagttcgaggtgaaagggcagggctaccgcgccttctggagccagcgccgt
gcgcgtgacaaggtcgacggtgcgctgcaggcgcccaaggtggagctggcgcgtatcgcc
gatggcgaaattctcaccgacaagattcgcgagaaggaaagcctgaccgccgagctgacc
ggcctggatttcgagcgattcaccaagtcgatgctgctcgctcagggcggcttcgcggcg
tttctcgaggccaatgccaaccagcgcgccgagctgctggaggagctgaccggcaccgag
gtctacgggcagatatcccagcaggtttacgagcgcaccaaggccgccgaacaggcgctg
ggcctgctgaaaagccgcgcccagggcatggagctgctggacgaggcgcagcgtgccgaa
ttgcaggccgaagccgagcgcctggcgcaggaacaggccccgttgcaggctgagcaacaa
acgctgctggccgggcagcgctggcgtgaggcgttgcagcgagccgagcaacaaaccggc
gaggcggcgcgagggttggagcaggcccagcaacgtcaggctgctgcggccgatgactta
cagcgtctggccgccagtgagccggcagcgcgtttacaaccgctgcaccaggcctggcag
caggcgcagcacgatagtcagcaggccgagcgcggtctgttcgcactgcgtgagcagatg
cagatgtgcgccgagcgtgaacggcaggcgttgtggcaggccagccatcatgcggggcac
tggcgtgagcagcggcacatcgcgttgacgcaggcgcagcaccagcatgccgatgtgcag
gcctggctgagcgagcgcagttcgcatgcgcgcctgggtgagttgctcagtggctgggac
gagcgcttcacgcaacgggccaaggctgagcaggcactgcagacagcgcaaacgcgccta
agcgactccgctgcacaactgacgacgttgcagcgccagcgtgacgagcagggtgtgcgt
ctgaccacgctacaacagcaggtgcagcaggcgcgtgacgtcgaggggcagcagcagggc
gccttgcaggctctgctgggtgatgccggtgaggcaggcttgcgccaggactggcagcgc
ctgcaaacgcgcagccgggtgttagatcgtttgcagcaattggcgcagagccgcgaggcc
ttggccgtacaactggccgagctgccaccgcgcctggctgagctgcagcgccgacaggcg
cacaagaacaccgagatcaacgccctgcgcgagcgttacaaggcactcaagcagcaggtc
gctgacaaggaaaagctgctggagcaggaaaaacggattcaggatctggaggcctatcgc
gcccgcctgcaaccgggcgatgcttgcccgctgtgcggctcgcacgagcatccggcgatc
agccagtaccaggcgctgaacgtctccgccaccgagcaggcgctgatgcagtgccgcagc
gagttggccgagctggagagccagggcgccaacctgcgtgatgagctgacccgtctcgcc
gcgcagatcgagcaggtgcagcaacaacaggctcaggccgaggcgcaattgctgccgctg
gatcagcagtggcagcagcaactgagcgaacatgacatccgcctgcaggacgtcgctgag
ctgacaggtgtgcaacagcagcacgagcaggaattggctgcgctccaggcgcgcctggaa
gcagcgcaggcacagcaaaccgagctgcagcgtctgcgcgagttacgcgaaagcgctgag
cgcgagcaggccgaggcagagcggcagcaggcaatactcagtcgcgatctggataacacc
caggtgcgtctgaccgagcaacaggcgcatctgagcgcgctgcagactgagttagcgcaa
caggcccaggaactgctggccagcctgcagggcttcgccagcgaactgccggccgacggc
gcaggctggttgacgcagcagaaagccgtctggcacgcctggcaacagacgcaggcgcgc
gagcagcagttgctcgaactcacgcgcgaggcgcaacgacaactggacgaagctcagacg
caggccgagcactggcagcagcgttggcaggacgcaggtgcgccgggcctggcgaccccg
gcagcggtagccgatccgcagcaggccctgcgtgaatccgccgagcggttggccgcgacc
ctgcgtgaacgcgatggcctcgctggcagcgagcaagcccaggaggccttgctggcgcgt
gagcagcaacgtctgcagagttgtcagcaggcttggcaacaggcgctgctgagcagcccc
ttcgccgaccagacggcgttcgaagcggcgctgttgagtgaggatgaacgcctgcgtttg
gtgcaactcaaggcggatctcgaacgtgcgcacacccaggctgcgaccttgctggcggcg
gctcaggccgaggtgcagcgcctcacggccgaagcgcaaaccgccttgagcctggaactg
ttggccgagcagctccaggcattgcaggaacgcctgcgcgccctgagcgagcgtcaaggt
gagctgcgcgcgcagttgcaggccgacgaggcgcggcgcagcagccagcaggccctgttc
gctgaaatcagtgcgcaggagagcgagcagcgcctgtggcaacagctcaacggcctgatc
ggctcggccgacggtgccaagttccgcaagtttgcccagggcctgaccctcgatcacctg
atccacctggccaaccgccaactgacgcgcttgcatggacgctatcagttggcgcgcaag
ggcagcggcgaactcgagctggaagtgcgcgacacctggcaggccgacgtggcgcgcgat
tgccgcacgctgtccggcggcgagagttttctggtcagcctggcgctggcgttggcgttg
tccgatctggtcagccacaagaccagcatcgactcgctgttcctcgatgaaggcttcggc
accctggacggcgagacgctggaggtggcgctcgatgcgttggacaacctcaatgccagc
ggcaagaccatcggtgtgatcagccacgtcgaggcgatgaaggagcgtattcccttgcag
ttgcgggtgcacaagggcgtcggcctcggttacagccggctcgatgcgcgttttgcggtg
aaggaaggagcgtag
DBGET
integrated database retrieval system
