Pseudomonas sediminis: HNQ25_07475
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Entry
HNQ25_07475 CDS
T07154
Symbol
der
Name
(GenBank) ribosome biogenesis GTPase Der
KO
K03977
GTPase
Organism
psej
Pseudomonas sediminis
Brite
KEGG Orthology (KO) [BR:
psej00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
psej03009
]
HNQ25_07475 (der)
Ribosome biogenesis [BR:
psej03009
]
Prokaryotic type
GTPases
HNQ25_07475 (der)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
MMR_HSR1
FeoB_N
KH_dom-like
GTP_EFTU
Dynamin_N
AIG1
RsgA_GTPase
ABC_tran
AAA_22
Roc
cobW
DUF5906
SRPRB
Ras
AAA_24
AAA_18
TniB
ATP_bind_1
AAA_14
NOG1
Motif
Other DBs
NCBI-ProteinID:
QNH02549
LinkDB
All DBs
Position
1564766..1566238
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AA seq
490 aa
AA seq
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MVPVIALVGRPNVGKSTLFNRLTRSRDAIVGDLSGLTRDRQYGEAKWQGRTYIVIDTGGI
SGDEEGIDAKMAEQSLQAIEEADAVLFLVDARAGMTASDQMIGEHLRRRNKQSFLVVNKV
DNLDVDLARAEFSPMGLGEPLAIAGAHGRGITQMLEVVLGAFPKDAGELEEGAEEEEVLE
GQEAKRIPGPSEKDGIKLAIIGRPNVGKSTLVNRMLGEERVIVYDQAGTTRDSIYIPFER
DDEKYTLIDTAGVRRRGKIFEAVEKFSVVKTLQAIQDSNVVVFVMDAREGVVDHDLNLLG
FVLESGRALVIALNKWDGMDQGQKDYVKTELERRLFFVDFADIHFISALHGTGVGHLYKS
VQASFKSAITRWPTSRLTQILEDAVSDHAPPLVNGRRIKLRYAHLGGANPPLIVIHGNQV
DAVPRAYSRYLENTFRRVLKLVGTPIRIEYKGGENPYEGNKNKLTDRQVNKKRRLMSHHK
KAEKKRKDKR
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atggttcccgtaattgccctggtgggccggccgaatgtcggcaagtccacgctcttcaac
cgcctgacccgcagccgcgacgctatcgtcggcgacctgtccggtctgacccgcgaccgc
cagtatggcgaggcgaagtggcaggggcgcacctatatcgttatcgacaccggtggtatt
tccggtgacgaggaaggcatcgacgcgaagatggccgagcagtcgctgcaggccatcgag
gaggccgatgccgtgctgttcctggtggacgcgcgcgctggcatgactgcctccgaccag
atgatcggcgagcacctgcgccgtcgtaacaagcagagcttcctcgtggtgaacaaggtc
gacaacctcgatgtcgatctggcccgcgccgagttcagccctatgggcctcggcgagccc
ctggcaattgccggtgctcacggccgcggcatcacccagatgctggaagtggttctcggc
gcgttccccaaggacgccggcgagctggaggagggtgccgaagaggaggaggtgctggaa
ggccaggaggctaagcgcattcccggcccgagcgagaaggacggcatcaagctggccatc
atcggtcgccccaacgtcggcaagtccaccctggtcaaccgcatgctcggcgaagagcgg
gtcatcgtctatgaccaggcggggaccacgcgtgacagcatctacattccgtttgagcgt
gacgacgagaagtacaccctgatcgataccgccggtgtgcgtcggcgcggcaagatcttc
gaggctgtggagaaattctccgtggtcaagacgctgcaggccattcaggactccaacgtc
gtggtgttcgtcatggacgcccgcgaaggtgtggtcgaccacgacctcaacctgctcggc
ttcgtgctggaaagcggtcgcgccctggtcatcgccctgaacaagtgggacggcatggat
cagggccagaaggattatgtgaagaccgagctggagcgccggctgttcttcgtcgacttc
gccgatatccacttcatttccgccctgcacggcaccggcgtgggccatctgtacaagtcg
gtgcaggcctcgttcaagtcggccatcacccgctggccgaccagccgcctaacgcagatt
ctcgaagatgccgtcagcgaccacgcgccgcctctggtcaacggtcgccgcatcaagctg
cgctatgcccacctgggcggtgccaacccgccgctgatcgtgatccacggtaaccaggtt
gacgccgtgccgcgtgcctactctcgttatctggaaaacaccttccgccgtgtgctgaaa
ctggtcggtacgccgatccgtatcgagtacaagggcggcgagaacccctatgagggcaac
aagaacaagctcaccgaccgtcaggtgaacaagaagcgccgcctgatgagccaccacaag
aaggccgagaagaagcgcaaggacaagcgctag
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