Pseudomonas sediminis: HNQ25_07670
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Entry
HNQ25_07670 CDS
T07154
Symbol
xerD
Name
(GenBank) site-specific tyrosine recombinase XerD
KO
K04763
integrase/recombinase XerD
Organism
psej
Pseudomonas sediminis
Brite
KEGG Orthology (KO) [BR:
psej00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
psej03036
]
HNQ25_07670 (xerD)
Chromosome and associated proteins [BR:
psej03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
HNQ25_07670 (xerD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
Phage_int_SAM_4
DUF3435
Motif
Other DBs
NCBI-ProteinID:
QNH02586
LinkDB
All DBs
Position
1606354..1607250
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AA seq
298 aa
AA seq
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MPALTHPLIERFLEALWLEKGLSAHTQAAYRSDLEHFNGWLDGRGLALQHIGRDAILDHL
AWRLEQGYQARSTARFLSGVRGFYRFLLRETLISDDPTLQIELPQIGRPLPKSLSEADVE
ALLQAPDLDDPIGLRDRAMLEVLYACGLRVSELIGLTLEQVNLRQGVLRVFGKGSKERLV
PLGEEAIAWVERYMREARPLLLGGKPSDVLFPSLRGEQMTRQTFWHRIKHQAQVAGISKA
LSPHTLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHIARARLQELHAQHHPRG
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgcctgcgctgactcaccctctgatcgagcgctttctcgaagcgttatggttggaaaaa
gggctttccgcccatactcaggccgcctatcgcagtgatctggagcacttcaatggctgg
ctcgatgggcgtggcctggcgctgcagcatatcggtcgcgacgccattctcgaccatctg
gcctggcgtctcgagcagggctatcaggcgcgctccacggcgcgctttctctccggtgtg
cgcggcttctaccgttttttgctgcgtgaaacgctgatcagtgacgacccgacgctgcag
atcgagttgccgcagatcggccggccgctgcccaagtcattgtctgaagcggatgtcgaa
gcgctgctgcaggcgccggacctggatgaccccatcggtcttcgcgatcgcgccatgctc
gaagtgctctatgcctgcggtttgcgtgtcagtgagctgattggcctgacgctggagcag
gtcaatctgcgccagggcgtactgcgggtattcggtaagggcagcaaggagcgcctggtg
ccgctgggtgaagaggctattgcctgggtcgagcgctacatgcgcgaagcacgcccgctg
ttgctgggcggtaaacccagtgatgtgctgtttcccagtctgcgcggcgagcagatgacc
cggcagaccttttggcaccgcatcaagcaccaggcgcaggttgcgggtatcagcaaggcg
ttgtcaccgcacacgctgcgccacgccttcgccacgcatttgctcaatcacggtgccgac
ctgcgtgtggtgcaaatgctgctggggcatagcgacctgtctaccacgcagatctatacc
catatcgcgcgtgcccgcctgcaggagctgcatgcgcagcaccatccgcgcggttga
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